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Breast Cancer Biomarker Analysis Gene Expression NCT01420185

NSABP B-28: Complete Statistical Analysis of 21-Gene Recurrence Score in Breast Cancer

An independent statistical review of NSABP B-28, evaluating whether the 21-gene recurrence score is associated with local recurrence risk and treatment-related outcomes in patients with breast cancer.

Registry analysis · NSABP Foundation Inc · Start date: 2011-10
Scope of this record

This page provides an independent statistical analysis and educational interpretation of publicly reported results. ClinicalTrials.gov provides the official trial registry record.

1. Trial at a Glance

NSABP B-28 was a breast cancer biomarker study designed to evaluate the relationship between the 21-gene recurrence score (RS) and clinically relevant outcomes.

1300
Enrollment
~4 years
Primary time frame
3
Primary endpoints
2015-12
Primary completion
FeatureNSABP B-28
NCT IDNCT01420185
StatusUNKNOWN
SponsorNSABP Foundation Inc
Sponsor typeNETWORK
ConditionBreast Cancer
Enrollment1300
InterventionsRNA analysis; gene expression analysis; microarray analysis; reverse transcriptase-polymerase chain reaction; laboratory biomarker analysis

2. Clinical Question

Population

Patients with breast cancer included in the NSABP B-28 study population.

Biomarker

The 21-gene recurrence score (RS).

Measurements

Gene expression and biomarker analyses using RNA and related laboratory approaches.

Primary question

How is the 21-gene RS associated with local recurrence risk and treatment-related outcomes?

3. Trial Design

Study type

Clinical biomarker analysis study.

Enrollment

1300 participants.

Study period

Started 2011-10 with primary completion in 2015-12.

Sponsor network

NSABP Foundation Inc, sponsor type NETWORK.

4. Endpoints

EndpointTime frame
Association between low, intermediate, and high 21-gene recurrence score (RS) and risk of LRRapproximately 4 years
Identification of a subgroup of patients who may or may not need radiotherapy after surgeryapproximately 4 years
21-gene RS in predicting treatment benefit, reducing LRR risk, and improving DFS and OS in node-positive ER+ patientsapproximately 4 years

5. Planned Analysis

The ClinicalTrials.gov record lists primary endpoints but does not report posted statistical analyses or endpoint results.

The registry-defined endpoints are association and prediction questions. For a recurrence-risk biomarker, statistical analysis would typically evaluate relationships between recurrence score categories and time-to-event outcomes such as local recurrence, disease-free survival, or overall survival. Analyses of this type commonly involve survival methods, regression modeling, and assessment of whether biomarker categories provide clinically meaningful separation of risk groups.

6. Statistical Methodology

Biomarker association analysis

The central statistical challenge in a genomic biomarker study is determining whether a measured biological characteristic is associated with future clinical outcomes. The recurrence score is treated as a prognostic or predictive marker depending on whether it describes baseline risk or modifies treatment benefit.

Conceptual framework

Clinical outcome = biomarker information + treatment information + patient characteristics + statistical uncertainty

Risk groups and clinical interpretation

The registry specifies low, intermediate, and high 21-gene recurrence score groups. Categorizing a continuous biomarker can make results easier to interpret clinically, but it may also reduce information compared with analyzing the underlying continuous measurement.

Time-to-event outcomes

Local recurrence risk, disease-free survival, and overall survival are examples of outcomes where follow-up time and censoring must be considered. Patients without an observed event contribute information until their last known follow-up.

7. Statistical Methods Explained

Why study the association between recurrence score categories and LRR?

Local recurrence risk is a clinically meaningful outcome. Comparing recurrence patterns across recurrence-score groups can evaluate whether the biomarker identifies groups with different observed risks.

What is the difference between prognostic and predictive biomarkers?

A prognostic biomarker is associated with outcome regardless of treatment. A predictive biomarker is associated with differential treatment benefit between treatment approaches.

Why are time frames important in biomarker studies?

A risk estimate is always connected to a follow-up period. The registry specifies approximately 4 years for the listed primary endpoints.

Why are confidence intervals important?

Confidence intervals describe uncertainty around an estimated association. They help distinguish a precise estimate from one based on limited information.

Why does association not prove causation?

A biomarker associated with an outcome may reflect underlying disease biology rather than directly causing the outcome.

8. Limitations

9. Why This Trial Matters Statistically

ConceptApplication
Biomarker validationEvaluating whether a molecular measurement is associated with clinical outcomes.
Risk stratificationComparing low, intermediate, and high recurrence score groups.
Time-to-event analysisRelevant for recurrence and survival outcomes.
Predictive modelingAssessing whether biomarkers relate to treatment benefit.

10. Sources