Topic: Spatial and Agent-Based Approaches

Modeling Directed Cell Migration by Chemotaxis

Lattice-Based and Off-Lattice Cell Models

Hybrid PDE-Agent Models for Cell-Tissue Systems

Finite-Difference Discretization of Diffusion

Diagnosing Identifiability with Spatial Data

Diagnosing Numerical Artifacts at Spatial Boundaries

Diffusion Lengths and Penetration Depths

Deriving the Diffusion Equation from Conservation

Designing Spatial Measurements for Model Calibration

Deriving Mean-Field Equations from Agent Rules