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Schizophrenia Phase 3 Binary Endpoint NCT04659174

An Extension Study to Assess Long-term Safety, Tolerability, and Efficacy of KarXT in Adult Patients With Schizophrenia (EMERGENT-4): Complete Statistical Analysis

This record describes an open-label extension study of KarXT in adults with schizophrenia, focused primarily on long-term safety and tolerability. The posted results include serious adverse-event counts, but do not report numerical results for the primary treatment-emergent adverse-event endpoint or the listed efficacy outcomes.

Trial start: 2021-02-01  ·  Enrollment: 152  ·  Sponsor: Karuna Therapeutics, Inc., a Bristol Myers Squibb company
Scope of this record

This page provides an independent statistical analysis and educational interpretation of publicly reported results. ClinicalTrials.gov provides the official trial registry record. Numerical trial results on this page are restricted to the results posted in the ClinicalTrials.gov record; calculations added by Clinical Biostats are labelled as such.

1. Trial at a Glance

This page covers the registry results for An Extension Study to Assess Long-term Safety, Tolerability, and Efficacy of KarXT in Adult Patients With Schizophrenia (EMERGENT-4) (NCT04659174), a na phase 3 study. The primary outcome is Number of Participants With Treatment-Emergent Adverse Events (TEAEs).

152
Enrollment
Phase 3
n/a
Arms
In the primary outcome
n/a
Effect
No re-analysis shown
n/a
95% CI
See limitations
FeatureRegistry value
ClinicalTrials.gov identifierNCT04659174
PhasePhase 3
ConditionSchizophrenia
AllocationNot applicable (single group)
Design modelSingle Group
MaskingNone (open label)
Enrollment152
Arms in the primary outcomen/a
Lead sponsorKaruna Therapeutics, Inc., a Bristol Myers Squibb company
Results postedYes

2. Clinical Question

Population

Adults with DSM-5 schizophrenia who had completed the treatment period of either KAR-007 or KAR-009 were eligible for this extension study. The registry record describes the study population as participants who entered after completing an earlier Phase 3 study; it does not give further eligibility details in the information summarized for this record.

Intervention

All participants received KarXT, a fixed combination of xanomeline 125 mg and trospium chloride 30 mg twice daily, for up to 52 weeks. The study was designed to assess long-term safety, tolerability, and efficacy during continued treatment.

Comparator

There was no concurrent randomized control group. Participants received KarXT regardless of their treatment assignment in the preceding acute study. The safety figures labelled KarXT Arm A and KarXT Arm B therefore should not be treated as results from a randomized comparison; the registry record does not explain the distinction between those labels.

Primary question

The primary objective was to assess long-term safety and tolerability, with the primary endpoint counting participants with treatment-emergent adverse events from the first dose to the end of study. Longer-term efficacy and trough concentrations of xanomeline and trospium were secondary objectives. Numerical results for the primary endpoint and efficacy outcomes are not reported in the registry record.

3. Trial Design

This was a Phase 3, multicenter, outpatient, open-label extension study. Its registered title identifies it as EMERGENT-4. Participants had DSM-5 schizophrenia and had completed the treatment period of one of the earlier Phase 3 studies, KAR-007 or KAR-009. The study was completed, with enrollment listed as 152.

The planned extension lasted 53 weeks, with KarXT administered for up to 52 weeks. The regimen was a fixed combination of xanomeline 125 mg and trospium chloride 30 mg twice daily. Treatment was given regardless of treatment assignment in the preceding acute study. Allocation is recorded as not applicable, masking as none, and the model as single group. These features mean the extension was not designed as a blinded randomized comparison of KarXT against a concurrent control.

The registry record lists the study start as 2021-02-01 and primary completion as 2023-10-03. Its primary objective concerned long-term safety and tolerability; the secondary objectives concerned efficacy and monitoring trough concentrations. The registered outcomes include adverse-event counts and changes in symptom and severity measures. Numerical results for those secondary efficacy outcomes are not reported in the registry record.

The safety results use the labels KarXT Arm A and KarXT Arm B. The record does not explain how participants were assigned to these labels or what distinguishes them. Because all participants received KarXT and there was no concurrent randomized control group, the arm labels do not establish a like-for-like treatment comparison.

4. Participant Flow and Accounting

The registry reports how participants moved through each stage of the study. All counts below are exactly as posted; missing counts are not inferred from other stages.

Overall Study

StageKarXT Arm AKarXT Arm B
STARTED6884
COMPLETED1916
NOT COMPLETED4968

Reasons for not completing this period:

ReasonKarXT Arm AKarXT Arm B
Sponsor decision to discontinue study02
Lost to Follow-up911
Adverse Event85
Withdrawal by Subject1733
Progressive disease02
Other reasons02
Participant fails to adhere to the protocol requirements149
Alcohol or illegal drug use03
Violation of entry criteria10
Death01

Analysis population for the primary outcome, as defined in the registry: All treated participants

5. Baseline Characteristics

The table reproduces the baseline characteristics posted in the registry, which describe the participants analysed at baseline and help show whether the randomized groups were comparable.

CharacteristicUnitKarXT Arm AKarXT Arm BTotal
Participants analysed6884152
Age, ContinuousYears46.8 (SD 10.94)43.3 (SD 12.07)44.9 (SD 11.67)
Sex: Female, Male: FemaleParticipants201838
Sex: Female, Male: MaleParticipants4866114
Ethnicity (NIH/OMB): Hispanic or LatinoParticipants4812
Ethnicity (NIH/OMB): Not Hispanic or LatinoParticipants6476140
Ethnicity (NIH/OMB): Unknown or Not ReportedParticipants000
Race/Ethnicity, Customized: American Indian or Alaska NativeParticipants000
Race/Ethnicity, Customized: AsianParticipants101
Race/Ethnicity, Customized: Native Hawaiian or Other Pacific IslanderParticipants000
Race/Ethnicity, Customized: Black or African AmericanParticipants464793
Race/Ethnicity, Customized: WhiteParticipants213556
Race/Ethnicity, Customized: OtherParticipants022
Race/Ethnicity, Customized: Unknown or Not ReportedParticipants000

6. Primary Endpoint

The registry lists the primary outcome as Number of Participants With Treatment-Emergent Adverse Events (TEAEs), measured over From first dose to end of study (Up to approximately 53 weeks).

ElementRegistry entry
Result typeCount Of Participants
Measure of spreadnot applicable
UnitParticipants
Endpoint classificationBinary Endpoint

The primary endpoint is the number of participants with treatment-emergent adverse events, assessed from the first dose of KarXT to the end of study, up to approximately 53 weeks. A treatment-emergent event is defined by onset on or after the first dose. The registry definition of an adverse event includes a symptom, physical sign, syndrome, or disease that emerges during the study or, if already present at baseline, worsens during the study. The definition applies regardless of suspected cause and refers to the National Cancer Institute Common Terminology Criteria for Adverse Events, version 5.0.

The endpoint population is all treated participants. Counting participants with at least one event gives a straightforward measure of how many experienced an event during the observation period. It does not, by itself, describe how many events each participant experienced, how long events lasted, or whether an event was considered related to treatment. The registry record does not report a numerical result for this primary endpoint.

General statistical context: Safety endpoints commonly use participant counts to describe the frequency of observed events during follow-up. Interpretation depends on the observation period and on which participants were included. A count does not establish cause: events occurring after treatment begins may have other explanations, and the registry definition explicitly does not require suspected causality.

7. Why No Re-analysis Is Shown

Reported as posted, not recalculated. Not a randomized comparison (allocation: NA); arms are not a like-for-like control comparison. A result is recalculated only when the posted data support a clean two-arm comparison, so no result is shown beyond what the sponsor posted.

8. Statistical Interpretation

Clinical Biostats interpretation

The posted safety results report serious adverse-event counts for the two KarXT-labelled groups. In KarXT Arm A, 5 participants were recorded with a serious adverse event among 68 at risk. In KarXT Arm B, 3 participants were recorded with a serious adverse event among 84 at risk. These are descriptive counts from an open-label extension, not evidence of a difference caused by treatment or of a difference between randomized groups.

The registry record also reports deaths of 0 in KarXT Arm A and 1 in KarXT Arm B. It does not state in the information summarized for this record whether the death was judged related to KarXT, nor does the count alone establish a cause. The listed serious-event terms include schizophrenia at 2.9%; fall, anxiety, and hallucination at 1.5% each; and death and influenza at 1.2% each. These term percentages describe entries in the safety record and should not be read as estimates of a treatment effect.

These serious-event figures are not the primary endpoint result. The primary endpoint is the number of participants with treatment-emergent adverse events, which includes events that are not classified as serious as well as serious events. A numerical result for that endpoint is not reported in the registry record. The posted information also does not include numerical results for the registered changes in PANSS or CGI-S scores or for PANSS response.

The extension followed participants who had completed an earlier study and then received open-label KarXT. This design can describe events observed among participants who entered and remained under follow-up, but it cannot provide the same controlled treatment contrast as a concurrent randomized trial. The registry record does not report an adjusted comparison, confidence intervals, or a statistical test for the serious-event counts. Without such results, the counts should be read as descriptive observations rather than as estimates of comparative risk.

In general, a confidence interval expresses the uncertainty around an estimated quantity under a specified statistical model. No interval for these serious-event results is reported in the registry record. The record also does not report enough detail to assess how incomplete follow-up, differences in time under observation, or participant characteristics may have influenced the counts. Consequently, the precision and comparability of the group-specific figures cannot be fully evaluated from the recorded results.

The available results do not answer the registered efficacy questions. Although symptom-scale changes and a responder outcome are listed, their numerical results are not reported in the registry record. Their absence from the posted results does not establish that there was no change; it means that the record does not provide figures from which to characterize the magnitude or precision of any change.

9. Statistical Methods Explained

What does an open-label extension show?

This study is described as an open-label extension: participants received the study treatment with no masking, after completing the treatment period of an earlier study. The registered plan states that all participants would receive KarXT irrespective of treatment assignment in the preceding acute study. As a result, the extension addresses questions about observations during continued treatment, rather than estimating a randomized contrast against a concurrent untreated or alternative-treatment group.

General statistical context: Randomization helps make treatment groups comparable at the start of a trial, on average, for measured and unmeasured characteristics. An extension that enrolls people who completed earlier trials has a different role. Its participants are selected from those who reached the extension, and its results describe that study population and follow-up. Such observations can be informative about longer-term experience, but they do not by themselves isolate the causal effect of treatment.

What does a participant count represent?

The primary endpoint is a count of participants with treatment-emergent adverse events. A participant-level count is distinct from a count of all individual events: someone with multiple events can still contribute as a participant with an event. The registry defines the event window as beginning on or after the first dose and ending at study completion. The outcome population is listed as all treated participants.

General statistical context: Participant counts are often paired with a denominator to convey how many people were observed in a particular group. The denominator and time period matter. If follow-up duration differs across participants, a simple count does not express the amount of time each person was observed. Analyses based on event rates or time to first event can address different questions, but the registry record does not report such an analysis for the primary endpoint.

How should the serious-event counts be read?

The registry record gives serious adverse-event counts and numbers at risk for KarXT Arm A and KarXT Arm B. These figures describe events recorded in the two labelled groups. They are not a randomized comparison: the study is listed as single group, with allocation not applicable and no masking. The record does not explain the distinction between the two arm labels, so their respective counts should not be interpreted as a treatment-versus-control result.

General statistical context: A difference between two observed counts can arise from chance, differing follow-up, or differences in the people observed, among other factors. A comparative analysis needs a clearly defined contrast and methods suited to the design. Merely placing group counts side by side does not supply that analysis. No adjusted estimates, uncertainty intervals, or inferential tests for these safety counts are reported in the registry record.

What is the role of uncertainty?

An estimate is more informative when its precision is also described. Confidence intervals are one way to show a range of values compatible with the observed data under a statistical model. They help distinguish a precise estimate from one that remains uncertain. The registry record does not report confidence intervals for the serious-event counts or for the primary endpoint. The posted information therefore does not establish how precisely the event experience has been estimated.

General statistical context: In some count data, variability is greater than a simple statistical model expects; this is called over-dispersion. A model that ignores over-dispersion can give uncertainty estimates that are too narrow. Whether over-dispersion is relevant depends on the data structure and the analysis. The registry record does not report a model for the primary count endpoint, so it is not possible to assess whether this issue was evaluated.

What analyses are documented?

The record identifies the endpoint, its time frame, and the treated population, and lists secondary outcomes. It does not report a detailed statistical analysis plan, the estimator used for the primary endpoint, a method for handling repeated or multiple events, covariate adjustment, or a hypothesis test for the reported serious-event counts. Those methods are not reported in the registry record. No recalculated estimates are presented in the available results, so there is no recalculation to compare with a sponsor analysis.

The registry also includes a general sample-size-planning description based on an observed effect, with a two-sided significance level of 0.05, equal allocation, and a normal approximation. That description is a planning illustration and is not the design rationale for this single-group extension. No numerical sample-size illustration is reported in the information available for these results. A planning calculation should not be confused with observed power, which is not reported in the registry record.

Why does the analysis population matter?

The primary endpoint specifies all treated participants as its population. This clarifies that the endpoint is intended to describe participants who received treatment, rather than only participants meeting a separate efficacy-analysis definition. The record does not report further details about exclusions, evaluability requirements, or how participants with incomplete follow-up were handled. Those details affect how completely the reported outcomes represent the enrolled population.

10. Exact Estimates for Each Arm

No two-arm comparison is shown for this trial, but each arm's result can still be summarized with exact interval estimates computed from the posted counts. The Clopper-Pearson interval is exact and conservative; the Wilson interval is a common closer-to-nominal alternative; the Bayesian credible interval uses a uniform Beta(1, 1) prior. For small groups the three can differ noticeably.

ArmParticipantsEventsObserved %Clopper-Pearson 95% CIWilson 95% CIBayesian 95% credible interval
KarXT Arm A683652.9%40.4% to 65.2%41.2% to 64.3%41.2% to 64.4%
KarXT Arm B844553.6%42.4% to 64.5%43.0% to 63.8%43.0% to 63.9%

R code and output

arm    <- c("KarXT Arm A", "KarXT Arm B")
n      <- c(68, 84)
events <- c(36, 45)
for (i in seq_along(n)) {
  ci <- binom.test(events[i], n[i])$conf.int          # Clopper-Pearson exact interval
  cr <- qbeta(c(0.025, 0.975), 1 + events[i], 1 + n[i] - events[i])   # Bayesian, uniform Beta(1,1) prior
  wi <- (function(x, n) { p <- x / n; z <- qnorm(0.975); d <- 1 + z^2 / n
    c((p + z^2 / (2 * n) - z * sqrt(p * (1 - p) / n + z^2 / (4 * n^2))) / d, (p + z^2 / (2 * n) + z * sqrt(p * (1 - p) / n + z^2 / (4 * n^2))) / d) })(events[i], n[i])
  cat(sprintf("ARM|%s|%d|%d|%.1f|%.1f|%.1f|%.1f|%.1f|%.1f|%.1f\n", arm[i], n[i], events[i], 100 * events[i] / n[i],
              100 * ci[1], 100 * ci[2], 100 * wi[1], 100 * wi[2], 100 * cr[1], 100 * cr[2]))
}
ARM  KarXT Arm A  68  36  52.9  40.4  65.2  41.2  64.3  41.2  64.4
ARM  KarXT Arm B  84  45  53.6  42.4  64.5  43.0  63.8  43.0  63.9

11. Multiplicity, Missing Data and Analysis Populations

The registry lists several secondary outcomes in addition to the primary safety endpoint. They include serious adverse events, treatment-emergent adverse events leading to study-drug discontinuation, changes in PANSS total, positive, negative, and Negative Marder Factor scores, change in CGI-S score, and PANSS response defined using a reduction threshold. These outcomes address different aspects of safety and symptom change.

When a study assesses multiple outcomes, the chance of at least one apparently notable finding can increase if each is tested separately without an adjustment or a prespecified hierarchy. Whether and how to control that issue depends on the study objectives and analysis plan. A multiplicity strategy, such as a testing hierarchy or adjustment, is not reported in the registry record. Numerical efficacy results and associated tests are also not reported, so the effect of any multiplicity approach cannot be evaluated.

Missing-data handling is not reported in the registry record. The record does not specify how incomplete outcome measurements, missed visits, withdrawal, or varying follow-up were treated in efficacy analyses. The listed primary safety population is all treated participants, but details about the availability of safety follow-up and the treatment of incomplete safety records are not reported.

The registry record also does not report a detailed analysis population for the secondary outcomes, an imputation method, a sensitivity analysis, or an approach to participants who discontinued treatment before the planned end of follow-up. These omissions limit assessment of whether the reported and unreported outcomes would represent everyone enrolled or only participants with particular observed measurements. The absence of these methodological details does not determine the direction of any potential bias; it means the reader cannot evaluate its size from the record.

12. Safety Results

The registry reports serious adverse events as affected participants divided by participants at risk.

ArmParticipants with serious adverse eventsParticipants at riskPercentage
KarXT Arm A5687.4%
KarXT Arm B3843.6%
Participants with at least one serious adverse event
Serious adverse events by armKarXT Arm A7.4%KarXT Arm B3.6%% of participants with at least one serious adverse event

Deaths

ArmDeaths (participants affected of at risk)
KarXT Arm A0 of 68
KarXT Arm B1 of 84

Other (non-serious) adverse events

Participants with at least one non-serious event at or above the registry's 5% reporting threshold.

ArmParticipants affected of at risk
KarXT Arm A19 of 68
KarXT Arm B31 of 84

Most frequent serious adverse event terms

Event termOrgan systemKarXT Arm AKarXT Arm B
SchizophreniaPsychiatric disorders2 of 681 of 84
DeathGeneral disorders0 of 681 of 84
InfluenzaInfections and infestations0 of 681 of 84
FallInjury, poisoning and procedural complications1 of 680 of 84
AnxietyPsychiatric disorders1 of 680 of 84
HallucinationPsychiatric disorders1 of 680 of 84

Most frequent non-serious adverse event terms

Event termOrgan systemKarXT Arm AKarXT Arm B
NauseaGastrointestinal disorders6 of 688 of 84
DyspepsiaGastrointestinal disorders5 of 688 of 84
VomitingGastrointestinal disorders2 of 6811 of 84
Weight increasedInvestigations3 of 686 of 84
Dry mouthGastrointestinal disorders3 of 685 of 84
HypertensionVascular disorders3 of 685 of 84
ConstipationGastrointestinal disorders4 of 683 of 84

Serious events with the highest arm-level rate: schizophrenia (2.9%), fall (1.5%), anxiety (1.5%), hallucination (1.5%), death (1.2%).

Do not overextend the safety comparison. Serious-adverse-event counts are safety observations, not efficacy outcomes, and should not be combined with the primary result into a single benefit-risk number.

The serious adverse-event counts are 5 among 68 at risk in KarXT Arm A and 3 among 84 at risk in KarXT Arm B. The registry also records deaths of 0 in KarXT Arm A and 1 in KarXT Arm B. These are descriptive safety figures in an open-label extension, not a randomized comparison. The record does not clarify the distinction between the arm labels, and it does not report an adjusted comparison or uncertainty interval for the counts.

Serious adverse events are not interchangeable with all treatment-emergent adverse events. The primary endpoint is broader, counting participants with treatment-emergent adverse events from first dose through the end of study, whether or not an event is serious. A numerical result for that endpoint is not reported in the registry record. The listed serious-event terms and percentages provide additional descriptive detail, but do not establish causation or comparative risk.

General statistical context: An adverse event recorded during treatment is not, by that timing alone, proof that treatment caused it. The registry definition includes events regardless of suspected cause. Interpretation also depends on duration of observation and completeness of follow-up, for which further details are not reported in the registry record.

13. What the Result Does, and Does Not, Mean

The record documents a completed open-label extension intended to follow adults with schizophrenia during continued KarXT treatment. It reports serious adverse-event counts in the two KarXT-labelled groups and lists serious-event terms. Those observations describe what was recorded among participants under follow-up in this study; they do not establish that KarXT caused or prevented any event.

The study design does not include a concurrent randomized control group. Participants received KarXT regardless of their prior assignment in an earlier acute study, and the record does not explain the distinction between Arm A and Arm B. Therefore, the group labels do not support a controlled estimate of a treatment effect. The reported counts should not be interpreted as evidence that one group had a better or worse outcome than the other.

The study registered a primary endpoint based on participants with treatment-emergent adverse events and secondary efficacy measures based on PANSS and CGI-S. Numerical results for those endpoints are not reported in the registry record. As a result, the posted information cannot characterize the overall frequency of treatment-emergent adverse events, the size or precision of symptom changes, or the proportion meeting the listed response definition.

The event counts also do not describe event duration, recurrence, severity beyond the serious-event classification, or treatment attribution. Further information about follow-up completeness, missing data, statistical comparisons, and uncertainty is not reported in the registry record. These limits matter when considering how broadly the observations apply beyond people who entered this extension after completing an earlier study.

In general, a safety extension can add descriptive information about events occurring over longer follow-up. It is not a substitute for a controlled comparison when the question is whether treatment changes the probability of an outcome. The registry results support a limited description of recorded serious events, not a conclusion about comparative safety or efficacy.

14. Why This Trial Matters Statistically

This study is statistically notable because it addresses a different question from a conventional randomized treatment comparison. It follows participants who completed an earlier study and receive open-label KarXT, with a primary objective of assessing long-term safety and tolerability. The registry records a planned follow-up of 53 weeks and treatment for up to 52 weeks, extending observation beyond an acute study period.

Longer follow-up can be relevant when the outcomes of interest include events that may emerge or accumulate during continued treatment. Participant counts and serious-event terms provide a descriptive view of what was recorded in this extension. They are not, however, a causal comparison. The open-label, single-group design, lack of a concurrent randomized control, and unexplained Arm A and Arm B labels constrain interpretation of group-specific counts.

The record also illustrates the distinction between registered outcomes and results available for interpretation. It lists several efficacy outcomes, but numerical results for those outcomes are not reported in the registry record. Likewise, a numerical result for the primary treatment-emergent adverse-event endpoint is not reported. Clear reporting of estimates, denominators, uncertainty, missing-data handling, and analysis populations would be needed to assess those questions more fully.

For biostatisticians and clinical researchers, the central issue is matching the claim to the design and the data actually reported. The serious-event counts can inform a descriptive account of observed events, while the absence of a controlled contrast and detailed statistical results limits estimation of comparative effects. The extension contributes follow-up context, but its posted results do not settle the listed efficacy questions.

15. Limitations

The most important design limitation for causal interpretation is the absence of a concurrent randomized control group. The study is open-label, allocation is listed as not applicable, and all participants received KarXT regardless of treatment assignment in the preceding acute study. Consequently, the serious-event counts cannot isolate an effect of treatment from other explanations.

The safety results use KarXT Arm A and KarXT Arm B labels, but the registry record does not explain what distinguishes those groups. They should not be assumed to represent randomized treatment arms or treated as a like-for-like comparison. The record does not report comparative estimates or uncertainty intervals for the serious-event counts.

The primary endpoint is defined, but its numerical result is not reported in the registry record. Numerical results for the listed efficacy outcomes are also not reported. The record does not provide detailed information about missing data, follow-up completeness, discontinuation handling, or analysis methods for these outcomes. This limits assessment of the precision and representativeness of the observations.

Participants entered after completing an earlier Phase 3 study. The registry record therefore describes an extension population rather than all people who might begin treatment in another setting. The extent to which entry or continuation into the extension selected participants with particular characteristics is not reported in the registry record. Likewise, attribution of the recorded events to treatment is not established by the endpoint definition, which includes events regardless of suspected cause.

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19. Record Summary

NCT04659174, EMERGENT-4, is a completed Phase 3, multicenter, outpatient, open-label extension study in adults with DSM-5 schizophrenia who had completed the treatment period of KAR-007 or KAR-009. The registered enrollment is 152. The study began on 2021-02-01 and reached primary completion on 2023-10-03.

Participants received KarXT, a fixed combination of xanomeline 125 mg and trospium chloride 30 mg twice daily, for up to 52 weeks. The primary objective was long-term safety and tolerability; efficacy and trough concentrations were secondary objectives. Serious adverse-event counts are reported for KarXT Arm A and KarXT Arm B, but numerical results for the primary treatment-emergent adverse-event endpoint and listed efficacy outcomes are not reported in the registry record.

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