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Alpha 1-Antitrypsin Deficiency Phase 4 Registry Results NCT00396006

Efficacy and Safety Study of Augmentation Therapy With ARALAST Fraction IV-1 (Human Alpha 1 - Proteinase Inhibitor): Complete Statistical Analysis

This analysis examines a completed, single-group study of ARALAST augmentation therapy in people with severe congenital alpha 1-antitrypsin deficiency. It focuses on the registry’s BAL epithelial lining fluid alpha1-proteinase inhibitor endpoint, the study design, and the limits of the posted results.

Trial start: 2006-10-27  ·  Enrollment: 21  ·  Sponsor: Baxalta now part of Shire
Scope of this record

This page provides an independent statistical analysis and educational interpretation of publicly reported results. ClinicalTrials.gov provides the official trial registry record. Numerical trial results on this page are restricted to the results posted in the ClinicalTrials.gov record; calculations added by Clinical Biostats are labelled as such.

1. Trial at a Glance

This page covers the registry results for Efficacy and Safety Study of Augmentation Therapy With ARALAST Fraction IV-1 (Human Alpha 1 - Proteinase Inhibitor) (NCT00396006), a non-randomized phase 4 study. The primary outcome is Change in Bronchoalveolar Lavage (BAL) Epithelial Lining Fluid (ELF) Alpha1-Proteinase Inhibitor (α1-PI) Level.

21
Enrollment
Phase 4
n/a
Arms
In the primary outcome
n/a
Effect
No re-analysis shown
n/a
95% CI
See limitations
FeatureRegistry value
ClinicalTrials.gov identifierNCT00396006
PhasePhase 4
ConditionAlpha 1-Antitrypsin Deficiency
AllocationNon-Randomized
Design modelSingle Group
MaskingNone (open label)
Enrollment21
Arms in the primary outcomen/a
Lead sponsorBaxalta now part of Shire
Results postedYes

2. Clinical Question

Population

The study concerned eligible subjects with a diagnosis of severe congenital alpha 1-antitrypsin deficiency. The registry lists Alpha 1-Antitrypsin Deficiency as the condition and identifies the primary endpoint population as per protocol. The number of participants included in that endpoint analysis is not reported in the registry record.

Intervention

Participants received intravenous functional ARALAST Fraction IV-1, described as alpha1-proteinase inhibitor augmentation therapy. The planned regimen was 60 mg/kg/week for 8 consecutive weeks. The study assessed changes in epithelial lining fluid analytes and safety, with BAL procedures at study initiation and after treatment.

Comparator

There was no separate comparator group. The study is listed as non-randomized, unmasked, and single-group. Its principal efficacy question therefore concerns change within the treated group from baseline to post-treatment, rather than a difference between treatment and control groups. A control condition or alternative therapy is not reported in the registry record.

Primary question

The primary endpoint asks how the BAL epithelial lining fluid alpha1-proteinase inhibitor level changed from baseline to post-treatment. The endpoint is described as the median change in antigenic α1-PI level, measured in μM. The registry describes BAL procedures at baseline and after 8 consecutive weeks of treatment, with a minimum study participation of 12 weeks. The numerical result for this endpoint is not reported in the registry record.

The study also aimed to assess other epithelial lining fluid analytes and safety. Secondary outcomes include measures involving antineutrophil elastase capacity, the α1-PI to human neutrophil elastase complex concentration, plasma α1-PI and antineutrophil elastase capacity, and clinically significant vital-sign changes. The registry lists 12 outcome measures overall, but it does not report a full set of numerical efficacy results in the record summarized for this analysis.

3. Trial Design

This was a completed Phase 4 study with a single-group, non-randomized design and no masking. The registry lists enrollment of 21. Participants with severe congenital alpha 1-antitrypsin deficiency were to receive intravenous ARALAST Fraction IV-1 once weekly for 8 consecutive weeks at 60 mg/kg/week. The study description specifies two bronchoscopies with bronchoalveolar lavage: one at study initiation and another at study termination. Imaging and laboratory assessments were also part of the planned safety evaluation. Each subject was to participate for a minimum of 12 weeks.

The recorded start date is 2006-10-27, the primary completion date is 2007-12-14, and the study status is completed. The primary endpoint was the median change from baseline in BAL epithelial lining fluid antigenic α1-PI level, expressed in μM. Its analysis population is listed as per protocol. The record does not state the number of participants included in that primary analysis, nor does it give the endpoint’s observed median change or full range.

Because the study had a single group, the baseline and post-treatment observations are measurements from the same treatment group rather than outcomes from randomized treatment and control arms. Such a design can describe within-group change over time, but it does not by itself separate a treatment-associated change from other explanations, such as changes over time or measurement variability. This is a general design consideration, not a conclusion about what caused any change in this study.

The registry does not report a detailed protocol for handling departures from the treatment regimen, the timing of each participant’s post-treatment measurement, or the number of participants who completed each assessment. Those details should not be inferred from the planned schedule. The enrollment figure is not necessarily the number contributing data to each outcome; the relevant analysis counts are not reported in the registry record.

The intervention is identified as a biological alpha1-proteinase inhibitor. The registry lists Baxalta now part of Shire as the sponsor. No randomized comparison is described, and the listed design does not support a like-for-like comparison between treatment arms. Interpretation should therefore remain focused on the endpoint definition and the information actually reported for the treated group.

4. Participant Flow and Accounting

The registry reports how participants moved through each stage of the study. All counts below are exactly as posted; missing counts are not inferred from other stages.

Before assignment: 21 participants enrolled: 4 were screen failures (i.e., did not meet inclusion/exclusion criteria), 3 were discontinued due to unevaluable baseline bronchoalveolar lavage (BAL) samples, and 1 subject withdrew consent prior to receiving investigational product.

Overall Study

StageParticipants Treated With ARALAST Fraction IV-1 (Fr. IV-1)
STARTED13
COMPLETED13
NOT COMPLETED0

Analysis population for the primary outcome, as defined in the registry: Per protocol

5. Baseline Characteristics

The table reproduces the baseline characteristics posted in the registry, which describe the participants analysed at baseline and help show whether the randomized groups were comparable.

CharacteristicUnitParticipants Treated With ARALAST Fr. IV-1
Participants analysed13
Age, Categorical: <=18 yearsParticipants0
Age, Categorical: Between 18 and 65 yearsParticipants10
Age, Categorical: >=65 yearsParticipants3
Age, Continuousyears59.6 (36.0 to 76.1)
Sex: Female, Male: FemaleParticipants6
Sex: Female, Male: MaleParticipants7
Region of Enrollment: AustraliaParticipants8
Region of Enrollment: New ZealandParticipants5

6. Primary Endpoint

The registry lists the primary outcome as Change in Bronchoalveolar Lavage (BAL) Epithelial Lining Fluid (ELF) Alpha1-Proteinase Inhibitor (α1-PI) Level, measured over BAL procedures were performed at baseline and after 8 consecutive weeks of treatment (minimum of 12 weeks).

ElementRegistry entry
Result typeMedian
Measure of spreadFull Range
UnitμM
Endpoint classificationnot reduced to a single comparison

The primary endpoint is the change in bronchoalveolar lavage epithelial lining fluid α1-PI level from baseline to post-treatment. The registry describes the measure as antigenic α1-PI, reports the unit as μM, and specifies the median and full range as the summary approach. BAL obtains a sample of material from the lower respiratory tract; the endpoint concerns α1-PI measured in the epithelial lining fluid rather than a blood concentration. The registry separately lists plasma α1-PI as a secondary outcome.

A pre-treatment and post-treatment measurement can describe whether the measured level changed during the study period. Using a median is a way to characterize the center of observed values that is less sensitive to extreme observations than an arithmetic mean. Reporting the full range conveys the span from the lowest to the highest observed values, though it does not show how values are distributed between those endpoints. These are general statistical explanations.

The endpoint is relevant to the study’s stated aim of evaluating effects on epithelial lining fluid α1-PI levels. It is a laboratory measure, not by itself a direct measure of symptoms, functioning, or clinical events. The observed median change, range, and analysis sample size are not reported in the registry record, so the magnitude and precision of the endpoint result cannot be assessed from the record.

7. Why No Re-analysis Is Shown

Reported as posted, not recalculated. Not a randomized comparison (allocation: non-randomized); arms are not a like-for-like control comparison. A result is recalculated only when the posted data support a clean two-arm comparison, so no result is shown beyond what the sponsor posted.

8. Statistical Interpretation

Clinical Biostats interpretation

The registry defines a primary endpoint but does not report its numerical result. In particular, the median change in BAL epithelial lining fluid α1-PI level and its full range are not reported in the registry record. Without those values, the direction, magnitude, and spread of the observed endpoint changes cannot be described. The record also does not report a confidence interval or a p-value for this endpoint, so statistical precision and evidence against a specified null hypothesis cannot be evaluated from the posted results.

Even when a within-group change estimate is available, its interpretation differs from that of a randomized treatment contrast. In a single-group study, measurements before and after treatment can show how the group’s observed values changed over the study period. Without a concurrent comparator, that change cannot be separated from time-related variation, measurement variation, or other influences. This is a general limitation of the design; it does not establish that any particular alternative explanation occurred in this study.

The primary analysis population is listed as per protocol. The record reports enrollment of 21, but does not state how many participants contributed paired BAL measurements or entered the per-protocol analysis. A participant’s inclusion in the enrollment count does not establish that all of that participant’s planned assessments were completed or analyzed. The registry also does not report how missing endpoint observations were handled.

The safety record lists an intent-to-treat group with 13 participants at risk for serious adverse events and 1 affected. It lists 13 at risk for other adverse events and 7 affected. The listed serious adverse event term is Hepatitis A antibody positive, with 7.7% shown. These safety entries should be read separately from the efficacy endpoint: they do not supply the missing primary endpoint estimate, and they do not establish a causal relationship between treatment and an event. Deaths are not reported in the registry record.

The registry lists 12 outcome measures and 5 analyses. The relationship between those outcomes and analyses, the prespecified testing hierarchy, and any adjustment for multiple statistical tests are not reported in the registry record. Consequently, the record does not establish whether reported secondary findings, if any, were confirmatory or exploratory. No numerical secondary efficacy results are included in the information available for this interpretation.

Planning illustrations based on an observed effect are not observed trial outcomes and are not a measure of the study’s achieved power. The registry states that such illustrations use a two-sided significance level of 0.05, equal allocation between two arms, and a normal approximation, with the effect defined as a stated fraction of the observed effect. Those assumptions describe a planning calculation, not this trial’s single-group design. The record does not report the trial’s own sample-size justification.

9. Statistical Methods Explained

The design determines which statistical questions the data can answer. This study is listed as non-randomized, unmasked, and single-group. Its primary endpoint compares a baseline measure with a post-treatment measure within the treated group. In general, paired measurements can describe within-person change and then summarize those changes across participants. A separate randomized comparison would be needed to directly estimate how outcomes differ between assigned treatment conditions; no such comparison is listed for this study.

What does the median describe?

The primary endpoint is summarized by a median change. In general, the median is the middle value after observations are ordered. It can be useful when values are skewed or when a small number of extreme values could strongly affect an arithmetic mean. The median does not describe every participant’s response, and it can conceal variation among individual changes. The registry specifies a full range as the accompanying dispersion summary. A range gives the lowest and highest observed values, but not the concentration or pattern of observations between those limits. The endpoint’s median and range are not reported in the registry record.

What does a confidence interval add?

In general, a confidence interval gives a range of estimates compatible with the data and the method used to construct it. It communicates uncertainty around an estimate, whereas a point estimate alone gives only one summary value. A narrow interval generally indicates greater precision than a wide interval under the same method and assumptions. The registry record summarized for this study does not report a confidence interval for the primary endpoint. Therefore, the precision of its estimated change cannot be assessed from a reported interval.

What does a p-value answer?

In general, a p-value describes how unusual data at least as inconsistent with a specified null hypothesis would be if that hypothesis and the analysis assumptions were true. It does not measure the size or clinical importance of an effect, and it does not give the probability that a treatment works. A p-value is also not a substitute for an effect estimate and an uncertainty interval. The registry record does not report a primary-endpoint p-value or identify the statistical test used for the primary analysis. No test or result should be inferred.

Why does the single-group structure matter?

With measurements collected before and after treatment in one group, the observed change combines any treatment-associated change with other changes occurring over time and with measurement variability. A control group can help distinguish those influences when the comparison is appropriately designed and analyzed. Here, the registry lists no comparator arm. The non-randomized allocation and absence of masking are further design features to consider, but the record does not describe their practical effects on measurement or conduct. They should not be treated as proof that bias occurred.

What is over-dispersion?

In general, over-dispersion occurs when observed variability is greater than a statistical model assumes. If a model understates variability, standard errors may be too small and confidence intervals may be too narrow. This issue is often relevant to count or event data, depending on the model. The primary endpoint is a continuous laboratory measure summarized by median and full range; the registry does not report a model or an over-dispersion assessment for it. It would therefore be inappropriate to claim that over-dispersion was present or that a particular correction was used.

How should planning illustrations be read?

The registry describes planning illustrations computed from an observed effect, with a two-sided significance level of 0.05, equal allocation between two arms, and a normal approximation. For time-to-event calculations, the stated quantity is a total number of events; other calculations are stated as participants per arm. These are planning assumptions for hypothetical comparisons, not the actual single-group allocation in this study. They are not observed power and do not show that the trial was adequately or inadequately powered. The record does not report a trial-specific sample-size justification, the effect used as the planning reference, or a prespecified target sample size.

10. Multiplicity, Missing Data and Analysis Populations

The registry lists 12 outcome measures and 5 analyses. It does not report a testing hierarchy, identify which outcomes were treated as confirmatory, or describe whether statistical significance thresholds were adjusted for multiple outcomes or analyses. When many hypotheses are tested, the chance of at least one apparently unusual result can increase; this is a general statistical concern, not evidence that a particular finding in this study is false. Without a stated analysis plan, the role of any individual secondary result cannot be determined from the registry record.

The primary endpoint population is labeled per protocol, while the adverse-event group is labeled intent to treat. These labels refer to different analysis populations and should not be assumed to contain the same participants. The registry reports enrollment of 21 and lists 13 participants at risk in each of the serious and other adverse-event categories. It does not explain the relationship between those counts and overall enrollment or give the primary endpoint analysis count. Reasons for any difference are not reported in the registry record.

The handling of missing baseline or post-treatment measurements, incomplete BAL procedures, and other missing outcome data is not reported in the registry record. The record also does not state whether all participants received the planned treatment schedule or how deviations were handled. Missing-data methods can affect an estimate when observations are incomplete, so the absence of this information limits assessment of the endpoint analysis. No imputation method, sensitivity analysis, or analysis-population reconciliation should be inferred.

11. Safety Results

The registry reports serious adverse events as affected participants divided by participants at risk.

ArmParticipants with serious adverse eventsParticipants at riskPercentage
Intent to Treat1137.7%

Other (non-serious) adverse events

Participants with at least one non-serious event at or above the registry's 0% reporting threshold.

ArmParticipants affected of at risk
Intent to Treat7 of 13

Most frequent serious adverse event terms

Event termOrgan systemIntent to Treat
Hepatitis A antibody positiveInvestigations1 of 13

Most frequent non-serious adverse event terms

Event termOrgan systemIntent to Treat
SluggishnessGeneral disorders2 of 13
Post procedural complicationInjury, poisoning and procedural complications2 of 13
InflammationGeneral disorders1 of 13
Vessel puncture site haematomaGeneral disorders1 of 13
BronchitisInfections and infestations1 of 13
SinusitisInfections and infestations1 of 13
ContusionInjury, poisoning and procedural complications1 of 13
Blood pressure systolic abnormalInvestigations1 of 13
Respiratory rate increasedInvestigations1 of 13
Back painMusculoskeletal and connective tissue disorders1 of 13

Serious events with the highest arm-level rate: hepatitis a antibody positive (7.7%).

Do not overextend the safety comparison. Serious-adverse-event counts are safety observations, not efficacy outcomes, and should not be combined with the primary result into a single benefit-risk number.

The registry lists an intent-to-treat safety group. For serious adverse events, it reports 13 participants at risk and 1 affected. For other adverse events, it reports 13 at risk and 7 affected. These are separate categories in the record; the counts should not be added or treated as mutually exclusive without further information. The registry does not report the number of events per affected participant or give event-level details for the other adverse events.

The leading serious adverse event term is Hepatitis A antibody positive, listed as 7.7%. The registry’s category counts and term listing are descriptive safety information. They do not, by themselves, establish that an event was caused by treatment, and the record does not provide a comparison group for estimating a treatment-related excess. Deaths are not reported in the registry record.

The risk period, definitions used for event attribution, severity grading, and details of clinical review are not reported in the registry record. Therefore, the figures should be read as counts and a listed term rather than as a complete account of safety. The number of participants at risk is not the same as the number of events, and a listed percentage does not convey the clinical context or timing of the event.

12. What the Result Does, and Does Not, Mean

The registry describes a study designed to measure change in BAL epithelial lining fluid α1-PI after a course of ARALAST Fraction IV-1 augmentation therapy. It establishes the endpoint definition, unit, summary approach, intended measurement times, and the single-group design. It also records enrollment of 21 and provides limited safety counts. These registry entries describe the study structure and some posted safety information.

The numerical primary endpoint result is not reported in the registry record. As a result, the posted record does not establish the size or direction of the median change, the range of changes, or the precision of the estimate. It also does not report a p-value or confidence interval for that endpoint. A conclusion about the magnitude of the observed laboratory change cannot be drawn from the endpoint description alone.

Even if a pre-to-post change estimate were available, the single-group, non-randomized design would support description of change during the study rather than a controlled estimate of the effect attributable to treatment. This is a general interpretation of the design, not a judgment about whether the intervention caused any specific change. No comparison with an untreated group or another therapy is listed.

The safety entries report affected-participant counts and a serious adverse event term, but they do not provide a randomized comparison or establish causality. They should not be interpreted as a complete estimate of risk. Information on event timing, attribution, and deaths is not reported in the registry record.

Overall, the record defines a biological and laboratory-focused research question and documents how the study was structured. It does not provide enough numerical efficacy information to characterize the primary outcome’s observed result. The listed planning illustrations, where available in the accompanying material, are hypothetical planning calculations rather than observed outcomes or evidence of achieved power.

13. Why This Trial Matters Statistically

This study is statistically informative as an example of the distinction between measuring change and estimating a comparative treatment effect. The primary endpoint uses baseline and post-treatment BAL epithelial lining fluid measurements in a single group. That structure can describe within-group change, but without a comparator it cannot distinguish treatment-associated change from other influences over time. This distinction is central when interpreting laboratory outcomes from non-randomized studies.

The endpoint also illustrates why the summary statistic matters. The registry specifies a median change and full range rather than a mean and standard deviation. Those summaries answer different descriptive questions: the median locates the center of the observed changes, while the range records their extremes. Neither alone describes the full distribution or quantifies uncertainty around the median. Since the numerical endpoint result and its analysis count are not reported in the registry record, readers cannot judge the observed spread or precision.

The contrast between overall enrollment and the listed safety denominator also highlights the importance of analysis populations. Enrollment is not automatically equivalent to the number analyzed for every outcome. The primary analysis is labeled per protocol, while the safety group is labeled intent to treat; the record does not explain the participant flow between these populations. Clear denominators and reasons for exclusions are important for assessing how representative an analysis may be.

Finally, multiple outcomes make prespecification and transparent reporting important. The registry lists 12 outcome measures and 5 analyses, but does not report a testing hierarchy or adjustment strategy. This does not show that an inappropriate analysis occurred; it means the record does not allow readers to assess how multiplicity was addressed. Together, these features make careful separation of design, result, and uncertainty essential.

14. Limitations

The most direct limitation for interpretation is that the registry does not report the numerical primary endpoint result. The median change and full range for BAL epithelial lining fluid α1-PI, the primary analysis count, and an uncertainty measure are not reported in the registry record. Without them, the endpoint’s observed magnitude, variability, and precision cannot be assessed.

The study is single-group, non-randomized, and unmasked. There is no listed control group to provide a concurrent contrast, and the design therefore does not isolate change associated with treatment from other changes over time. This is a limitation of what the design can establish, not evidence that a particular source of bias affected the findings. The registry does not describe assessment blinding or additional safeguards.

The primary analysis population is per protocol, but the number included and the criteria for that population are not reported in the registry record. The record reports enrollment of 21 and safety denominators of 13, without a participant flow or explanation of the difference. Completion of the planned regimen, completion of BAL procedures, and handling of protocol deviations are also not reported.

Missing-data methods, the statistical test for the primary endpoint, and any sensitivity analyses are not reported in the registry record. Nor does it describe a multiplicity strategy across the listed outcomes and analyses. These omissions limit assessment of analytical robustness and the confirmatory status of any secondary findings. The efficacy outcomes beyond their names and the primary endpoint definition are not numerically reported in the record summarized for this interpretation.

Safety reporting is limited to the listed affected-participant counts and serious adverse event term. Event timing, attribution, severity details, and deaths are not reported in the registry record. These limits make the safety entries descriptive rather than a complete comparative assessment.

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18. Record Summary

NCT00396006 is a completed Phase 4, non-randomized, unmasked, single-group study of ARALAST Fraction IV-1 augmentation therapy in severe congenital alpha 1-antitrypsin deficiency. The registry lists enrollment of 21 and a regimen of 60 mg/kg/week intravenously for 8 consecutive weeks. The primary endpoint is median change in BAL epithelial lining fluid antigenic α1-PI, measured in μM, from baseline to post-treatment; the analysis population is per protocol.

The study record describes BAL procedures at baseline and after treatment, with minimum participation of 12 weeks. It lists 12 outcome measures and 5 analyses. Numerical results for the primary endpoint, its analysis count, and methods for missing data and multiplicity are not reported in the registry record. The safety entries list 13 at risk and 1 affected for serious adverse events, and 13 at risk and 7 affected for other adverse events. The serious adverse event term Hepatitis A antibody positive is listed as 7.7%.

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