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Malaria, Falciparum Phase 2 Registry Results NCT01213966

Efficacy, Tolerability, PK of OZ439 in Adults With Acute, Uncomplicated P.Falciparum or Vivax Malaria Mono-infection: Complete Statistical Analysis

This record describes an exploratory, open-label Phase IIa study of OZ439 in adults with acute, uncomplicated falciparum or vivax malaria mono-infection. The primary endpoint was a model-derived parasite reduction rate 24 hours after dosing, but its result value is not reported in the registry record.

Trial start: 2010-10  ·  Enrollment: 82  ·  Sponsor: Medicines for Malaria Venture
Scope of this record

This page provides an independent statistical analysis and educational interpretation of publicly reported results. ClinicalTrials.gov provides the official trial registry record. Numerical trial results on this page are restricted to the results posted in the ClinicalTrials.gov record; calculations added by Clinical Biostats are labelled as such.

1. Trial at a Glance

This page covers the registry results for Efficacy, Tolerability, PK of OZ439 in Adults With Acute, Uncomplicated P.Falciparum or Vivax Malaria Mono-infection (NCT01213966), a non-randomized phase 2 study. The primary outcome is Derived Parasite Reduction Rate at 24 Hours (PPR24).

82
Enrollment
Phase 2
n/a
Arms
In the primary outcome
n/a
Effect
No re-analysis shown
n/a
95% CI
See limitations
FeatureRegistry value
ClinicalTrials.gov identifierNCT01213966
PhasePhase 2
ConditionMalaria, Falciparum, Malaria, Vivax
AllocationNon-Randomized
Design modelSingle Group
MaskingNone (open label)
Enrollment82
Arms in the primary outcomen/a
Lead sponsorMedicines for Malaria Venture
Results postedYes

2. Clinical Question

Population

Adults with acute, uncomplicated Plasmodium falciparum or vivax malaria mono-infection. The registry lists malaria, falciparum and malaria, vivax as the conditions. It does not report the number of participants with each infection type, or provide further eligibility details in the record.

Intervention

OZ439, given in dose cohorts described as 200 mg, 400 mg, 800 mg, or 1200 mg as a single oral dose. The record's study description also refers to single-dose and multiple-dose testing, but the listed cohort descriptions are single-dose regimens.

Comparator

There was no randomized control group. The registry identifies a non-randomized, single-group model and lists the OZ439 dose cohorts. Comparisons among cohorts should not be read as randomized, like-for-like treatment comparisons.

Primary question

What parasite reduction rate at 24 hours, derived from parasite-count measurements and a patient-level regression model, was observed after OZ439 administration? The endpoint is reported as a median with a full range. The result value itself is not reported in the registry record.

The study's stated aims also included preliminary assessment of tolerability and pharmacokinetics. These aims describe what the study set out to assess; they do not establish what the results showed. Although the registry records 82 enrolled participants and four dose cohorts, it does not report infection-type breakdowns, cohort assignment details, or a control condition for interpreting changes in parasite counts.

3. Trial Design

This was a Phase IIa exploratory, open-label study of OZ439 in adults with acute, uncomplicated falciparum or vivax malaria mono-infection. The registry classifies allocation as non-randomized, masking as none, and the model as single group. These design features mean that the listed dose cohorts were not allocated through a randomized comparison, and treatment was not masked.

The registry lists four cohorts: OZ439 200 mg, 400 mg, 800 mg, and 1200 mg, each described as a single oral dose. The adverse-event record gives cohort sizes at risk of 20, 20, 20, and 21, respectively. The overall recorded enrollment is 82. The registry does not explain how participants were assigned to cohorts or whether cohort entry was sequential.

The study description refers to single-dose and multiple-dose testing, while the arm descriptions in the record identify single-dose cohorts. The detailed regimen beyond those arm descriptions is not reported in the registry record. The primary endpoint was the derived parasite reduction rate at 24 hours after study drug administration. The registry gives it as a median, with full range as the dispersion measure.

There is no randomized comparator arm, and the registry explicitly flags the arms as not being a like-for-like control comparison. Differences across dose cohorts could reflect factors besides dose, but the registry record does not provide information that would allow those factors to be assessed. The record is marked completed, and enrollment was 82. Further details on recruitment, follow-up, protocol deviations, and the analysis population are not reported in the registry record.

4. Participant Flow and Accounting

The registry reports how participants moved through each stage of the study. All counts below are exactly as posted; missing counts are not inferred from other stages.

Before assignment: There was no washout, run-in or transition following enrolment but prior to group assignment.

Overall Study

Stage800 mg OZ439 po Single Dose400 mg OZ439 p.o. Single Dose200mg OZ439 p.o. Single Dose1200 mg OZ439 po Single Dose
STARTED20202021
COMPLETED19201720
NOT COMPLETED1031

Reasons for not completing this period:

Reason800 mg OZ439 po Single Dose400 mg OZ439 p.o. Single Dose200mg OZ439 p.o. Single Dose1200 mg OZ439 po Single Dose
Protocol Violation1031

5. Baseline Characteristics

The table reproduces the baseline characteristics posted in the registry, which describe the participants analysed at baseline and help show whether the randomized groups were comparable.

CharacteristicUnitCohort 1 - OZ439 800mgCohort 2 - OZ439 400mgCohort 3 - OZ439 200mgCohort 4 - OZ439 1200mgTotal
Participants analysed2021202182
Age, Categorical: <=18 yearsParticipants00000
Age, Categorical: Between 18 and 65 yearsParticipants2021202182
Age, Categorical: >=65 yearsParticipants00000
Age, Continuousyears27.2 (SD 8.37)29.1 (SD 9.82)26.7 (SD 9.75)29.3 (SD 8.19)28.1 (SD 8.97)
Sex: Female, Male: FemaleParticipants241411
Sex: Female, Male: MaleParticipants1817191771
Region of Enrollment: Thailandparticipants2021202182

6. Primary Endpoint

The registry lists the primary outcome as Derived Parasite Reduction Rate at 24 Hours (PPR24), measured over 24 hours after study drug administration.

ElementRegistry entry
Result typeMedian
Measure of spreadFull Range
UnitLog10 parasites/24h
Endpoint classificationnot reduced to a single comparison

The primary endpoint is the derived parasite reduction rate at 24 hours, abbreviated PPR24, with units of log10 parasites per 24 hours. It is intended to characterize the change in parasite count over the period after study drug administration. Parasite counts were measured at multiple time points, and a regression model was fitted separately for each patient.

According to the registry description, the model allowed for a variable lag phase followed by a linear decline in the relationship between time and the natural logarithm of parasite count. The slope of that log-linear relationship was designated the primary endpoint. The endpoint description calls the measure a log10 change in parasitemia over 24 hours; the registry does not report the actual cohort medians or full ranges.

Using repeated measurements in a patient-level model is a way to describe the pattern of parasite counts over time rather than relying only on a single pair of measurements. A lag phase allows the fitted pattern to include an interval before the modeled decline. These are general features of the stated approach, not evidence that a particular decline occurred in this study.

The registry says the selected regression time points were those yielding the highest significance when assessing the regression, when the number of time points was at least 3. It also says that no extrapolation was performed. The endpoint's result, its uncertainty, and the analysis population used to derive it are not reported in the registry record. Without those results, the size and precision of the observed parasite reduction cannot be characterized.

7. Why No Re-analysis Is Shown

Reported as posted, not recalculated. Not a randomized comparison (allocation: non-randomized); arms are not a like-for-like control comparison. A result is recalculated only when the posted data support a clean two-arm comparison, so no result is shown beyond what the sponsor posted.

8. Statistical Interpretation

Clinical Biostats interpretation

The record identifies a primary endpoint and describes how it was derived, but it does not report the endpoint's numerical result. In particular, no median PPR24 or full range is stated. It is therefore not possible to describe the observed parasite reduction rate, its variation across participants, or how estimates compared across the dose cohorts from the registry record alone.

The endpoint was intended to summarize the relationship between parasite counts and time after dosing. Each patient's measurements were modeled separately, with a variable lag phase and a subsequent linear decline on the natural-log scale. The record specifies that the endpoint is a log10 change over 24 hours, while the fitted relationship is described using the natural logarithm of parasite count. The registry does not give additional detail on the transformation from the fitted slope to the reported endpoint.

The result is described using a median and full range. Generally, the median represents the central observation when values are ordered, while the full range shows the smallest and largest reported values. A full range is sensitive to extreme observations and, by itself, does not quantify the precision of the median. No confidence interval or other uncertainty interval for the primary endpoint is reported in the registry record.

The design also constrains interpretation. The study was open label, non-randomized, and classified as single group. The dose cohorts do not constitute a randomized control comparison. A difference in an endpoint across dose cohorts, if reported elsewhere, would not by itself establish that dose caused the difference, because the registry does not document random allocation or report information sufficient to rule out cohort differences.

The registry records 82 enrolled participants, but enrollment is not the same as the number included in a particular endpoint analysis. The number with usable parasite-count measurements, the handling of missing measurements, and the analysis population are not reported in the registry record. The study's aims included preliminary efficacy, tolerability, and pharmacokinetics; the presence of those aims should not be mistaken for a numerical efficacy finding.

For safety, the registry gives counts of participants affected by serious and other adverse events by cohort. Those descriptive counts do not establish comparative safety, especially without a randomized control group or further details about event timing, attribution, and follow-up. The serious-event terms listed with percentages are Malaria relapse at 5.0% and Pyelonephritis at 4.8%. The record does not connect those terms to specific cohorts in the information available.

Overall, the registry record supports a description of the design, endpoint construction, and some adverse-event counts. It does not report the primary endpoint result or its precision. Consequently, the magnitude of the endpoint, differences among doses, and the reliability of any such differences cannot be assessed from this record.

9. Statistical Methods Explained

How is PPR24 constructed?

The registry describes a patient-level regression of parasite counts over time. The model first allows a variable lag phase and then fits a linear decline to the relationship between time and the natural logarithm of parasite count. The slope of that log-linear relationship is designated the primary endpoint. The endpoint is expressed as a log10 change in parasitemia over 24 hours.

In general, regression estimates a trend by relating observed values to a predictor, in this case time. Modeling each patient separately means that the endpoint is derived from that patient's measurements rather than from a single pooled regression across all participants. The registry does not provide the individual measurements, fitted slopes, or the transformation details needed to reproduce the reported endpoint.

What does the lag phase allow?

As a general modeling concept, a lag phase allows the fitted pattern to include an initial interval that does not follow the later linear trend. This can be useful when the time course is not well represented by one straight line from the start. The record says that a variable lag phase was fitted but does not report the estimated lag periods or describe how they varied across participants.

The registry also states that when there were at least 3 time points, the chosen time points were those yielding the highest degree of significance when assessing the regression. Selecting time points based on the strength of a fitted relationship can affect how the resulting slope should be interpreted. The record does not give further detail about the selection procedure, its prespecification, or any adjustment for that selection.

Why does the record say no extrapolation was performed?

In general, extrapolation means extending a fitted trend beyond the range of observed data. The registry states that no extrapolation was performed. This indicates that the endpoint was not described as relying on a projected trend outside the observations used for fitting. The record does not give the measurement schedule or the observed time range, so the extent of the data supporting each fitted slope cannot be assessed.

What does median with full range convey?

The registry specifies the median as the summary measure and the full range as the dispersion measure. In general, the median describes the middle of an ordered set of values, while the full range identifies its endpoints. The full range gives information about spread but can be strongly influenced by extreme values; it is not a confidence interval and does not directly express uncertainty about the median. Neither the median nor the range is numerically reported for PPR24 in the registry record.

A confidence interval, as a general statistical concept, describes a range of values compatible with an estimate under a specified procedure and assumptions. No confidence interval for PPR24 is reported. Without an estimate and an uncertainty measure, the precision of the primary endpoint cannot be evaluated.

How should the dose cohorts be compared?

The registry classifies allocation as non-randomized and the model as single group. Randomization is a general method for making treatment groups comparable, on average, with respect to measured and unmeasured characteristics. Because this study is not described as randomized and has no listed control group, the dose cohorts should not be treated as randomized, like-for-like comparisons. The record does not report how participants entered each cohort or whether cohort characteristics differed.

The dose descriptions identify single oral doses of 200 mg, 400 mg, 800 mg, and 1200 mg. They do not establish that dose was the only difference between cohorts. If outcome values differ across cohorts, the record alone cannot separate a dose-related pattern from other possible differences in participants, timing, or study conduct.

What can the safety counts establish?

The registry lists the number at risk and the number affected by serious and other adverse events for each cohort. These are descriptive counts. In general, counts can show how many participants in a recorded group had an event, but interpretation also depends on event definitions, follow-up, exposure, and how events were collected. Details on these matters are not reported in the registry record.

For other adverse events, the record lists 4 affected in the 800 mg cohort, 6 in the 400 mg cohort, 10 in the 200 mg cohort, and 8 in the 1200 mg cohort. For serious adverse events, it lists 0 affected in the 800 mg and 400 mg cohorts, and 1 affected in the 200 mg and 1200 mg cohorts. The record does not give event-level timing or causal attribution. These counts should not be interpreted as evidence of a comparative effect between doses.

What statistical planning information is missing?

The registry record does not report the statistical analysis plan, any sample-size justification, interim analyses, or a planned multiplicity procedure. It also does not report confidence intervals, p-values, or the primary endpoint values. General explanations of these methods cannot fill those gaps: without the registered analysis details and the endpoint results, it is not possible to determine how the primary analysis was conducted beyond the endpoint description or how its precision was assessed.

10. Multiplicity, Missing Data and Analysis Populations

The registry lists 1 outcome measure and 1 analysis, and identifies PPR24 as the primary endpoint. It does not report a statistical plan explaining whether additional analyses or comparisons were planned, or how multiplicity was handled. Multiplicity refers, in general, to the issue that conducting several statistical tests can increase the chance of obtaining an apparently notable result by chance. Whether that issue arose in this study cannot be determined from the registry record.

The record does not report interim analyses, prespecified dose comparisons, or adjustments for selecting regression time points. It says that, when at least 3 time points were available, the time points yielding the highest degree of significance in assessing the regression were selected. Further information about whether this procedure was prespecified or how its statistical implications were considered is not reported in the registry record.

Enrollment was 82, but the number included in the primary endpoint analysis is not reported. The registry does not describe missing parasite measurements, exclusions, withdrawals, or how incomplete data were handled. It also does not identify an analysis population, such as all enrolled participants or participants meeting a stated analysis definition. These details matter because the analyzed participants and their available measurements determine which observations contribute to the result.

The record gives a median and full range as the intended endpoint summary but does not provide those values, a confidence interval, or a p-value. The statistical plan and missing-data procedures are not reported in the registry record. As a result, the endpoint's numerical estimate, its precision, and the sensitivity of the result to missing data cannot be assessed.

11. Safety Results

The registry reports serious adverse events as affected participants divided by participants at risk.

ArmParticipants with serious adverse eventsParticipants at riskPercentage
Cohort 1 - OZ439 800mg0200.0%
Cohort 2 - OZ439 400mg0200.0%
Cohort 3 - OZ439 200mg1205.0%
Cohort 4 - OZ439 1200mg1214.8%
Participants with at least one serious adverse event
Serious adverse events by armCohort 1 - OZ439 800mg0.0%Cohort 2 - OZ439 400mg0.0%Cohort 3 - OZ439 200mg5.0%Cohort 4 - OZ439 1200mg4.8%% of participants with at least one serious adverse event

Other (non-serious) adverse events

Participants with at least one non-serious event at or above the registry's 5% reporting threshold.

ArmParticipants affected of at risk
Cohort 1 - OZ439 800mg4 of 20
Cohort 2 - OZ439 400mg6 of 20
Cohort 3 - OZ439 200mg10 of 20
Cohort 4 - OZ439 1200mg8 of 21

Most frequent serious adverse event terms

Event termOrgan systemCohort 1 - OZ439 800mgCohort 2 - OZ439 400mgCohort 3 - OZ439 200mgCohort 4 - OZ439 1200mg
PyelonephritisInfections and infestations0 of 200 of 200 of 201 of 21
Malaria relapseInfections and infestations0 of 200 of 201 of 200 of 21

Most frequent non-serious adverse event terms

Event termOrgan systemCohort 1 - OZ439 800mgCohort 2 - OZ439 400mgCohort 3 - OZ439 200mgCohort 4 - OZ439 1200mg
Blood Creatine PK IncreasedInvestigations1 of 201 of 205 of 201 of 21
Bundle branch block rightCardiac disorders1 of 201 of 200 of 201 of 21
HyperglycemiaMetabolism and nutrition disorders0 of 200 of 202 of 201 of 21
VomitingGastrointestinal disorders0 of 201 of 200 of 202 of 21
ALAT IncreasedInvestigations0 of 201 of 202 of 200 of 21
Heamoglobin decreasedInvestigations0 of 202 of 200 of 201 of 21
AnemiaBlood and lymphatic system disorders0 of 200 of 201 of 201 of 21
ASAT IncreasedInvestigations0 of 201 of 201 of 200 of 21
DizzinessNervous system disorders0 of 200 of 200 of 202 of 21
DiarrheaGastrointestinal disorders0 of 200 of 200 of 201 of 21

Serious events with the highest arm-level rate: malaria relapse (5.0%), pyelonephritis (4.8%).

Do not overextend the safety comparison. Serious-adverse-event counts are safety observations, not efficacy outcomes, and should not be combined with the primary result into a single benefit-risk number.

The registry lists serious adverse events for each OZ439 cohort. In the 800 mg cohort, 0 of 20 participants at risk were listed as affected; in the 400 mg cohort, 0 of 20; in the 200 mg cohort, 1 of 20; and in the 1200 mg cohort, 1 of 21. The record separately lists other adverse events: 4 of 20, 6 of 20, 10 of 20, and 8 of 21 participants affected in those cohorts, respectively.

These are cohort-level counts, not randomized comparisons. The record does not report event timing, duration, severity grading beyond the serious-event category, causal attribution, or whether participants could contribute more than one event. The registry also lists Malaria relapse at 5.0% and Pyelonephritis at 4.8% among the top serious-event terms, without linking those terms to specific cohorts in the record.

Deaths are not reported in the registry record. The counts describe events recorded during the study; without further details they cannot establish that OZ439 caused an event or that one dose had a different safety profile from another. They also do not provide a comparison with untreated participants or another treatment.

12. What the Result Does, and Does Not, Mean

This registry record documents an exploratory Phase IIa study of OZ439 in adults with acute, uncomplicated falciparum or vivax malaria mono-infection. It identifies a model-derived parasite reduction rate at 24 hours as the primary endpoint and describes the regression approach used to derive it. It also records four single-dose cohorts and adverse-event counts.

The record does not report the numerical PPR24 result. Without the median and full range, there is no basis in this record for describing the observed endpoint value or its variability. The record also does not report a confidence interval or other uncertainty measure, so the precision of the endpoint cannot be characterized.

The design was open label, non-randomized, and classified as single group. The cohorts were not randomized control groups, and the registry explicitly cautions that the arms are not a like-for-like control comparison. Therefore, the design does not support treating differences among cohorts as randomized evidence of a dose effect. No conclusion about comparative efficacy or safety follows from the cohort labels alone.

The study description states that preliminary efficacy, tolerability, and pharmacokinetics were assessed. Those objectives are not results. The registry record does not report pharmacokinetic findings or a numerical efficacy result, and it does not provide enough detail to determine how missing measurements or the analysis population were handled.

The adverse-event counts indicate how many participants in each cohort were recorded as affected, but do not establish causation or comparative risk. Event attribution, timing, and other interpretive details are not reported. The record is therefore useful for understanding the study's basic design and endpoint method, while leaving the primary outcome's magnitude and precision unresolved.

13. Why This Trial Matters Statistically

This study is statistically notable for defining a patient-level, time-course endpoint rather than relying only on a single parasite-count measurement. The endpoint description specifies a variable lag phase followed by a linear decline in log parasite count, with the fitted slope serving as the primary measure. This makes the modeling choices, measurement schedule, and data available for each patient important to interpretation.

The registry also illustrates why a detailed endpoint method is not a substitute for a reported result. Although the method and summary form are described, the median PPR24 and full range are not reported. Without the estimate and its uncertainty, readers cannot assess the magnitude or precision of the primary outcome from this record.

Its design is equally important to statistical interpretation. The study was non-randomized and single group, with dose cohorts rather than a randomized control arm. That structure can support descriptive reporting of outcomes within cohorts, but it limits the extent to which differences among cohorts can be interpreted as effects caused by dose. The record itself cautions that the arms are not like-for-like control comparisons.

Finally, the record makes visible distinctions between study aims, endpoint construction, and results. It identifies preliminary efficacy, tolerability, and pharmacokinetics as objectives, but does not report the primary endpoint value or pharmacokinetic findings. For clinical researchers, this is a reminder that registry descriptions can establish what was intended and how an endpoint was defined while still leaving key result and analysis details unreported.

14. Limitations

The most important limitation for interpreting the primary endpoint is that its numerical result is not reported in the registry record. The median PPR24, full range, and any confidence interval are absent. The record describes how the endpoint was modeled but does not provide the measurements, fitted slopes, or sufficient detail to reproduce the calculation.

The time-point selection rule also deserves attention. The record states that when the number of time points was at least 3, the points yielding the highest degree of significance when assessing the regression were chosen. It does not state whether this selection rule was prespecified or how its impact on inference was addressed. The measurement schedule and the number of observations available for each patient are not reported.

Because the study was open label and non-randomized, with no listed control arm, comparisons across the dose cohorts are not randomized comparisons. The record does not explain how participants were assigned to cohorts, nor does it give cohort characteristics that could help assess whether groups were comparable. The single-group classification and absence of a like-for-like control constrain causal interpretation.

The registry records 82 enrolled participants but does not report the primary analysis population, the number with usable endpoint data, or how missing observations and withdrawals were handled. The statistical analysis plan, sample-size justification, interim analyses, and multiplicity approach are also not reported in the registry record.

For safety, the record gives affected counts and selected serious-event terms but lacks details on event timing, attribution, and ascertainment. Deaths are not reported in the registry record. These gaps limit interpretation of both the primary endpoint and the adverse-event summaries.

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18. Record Summary

The registry record describes NCT01213966, a completed, open-label Phase IIa exploratory study of OZ439 in adults with acute, uncomplicated falciparum or vivax malaria mono-infection. It records 82 enrolled participants and a non-randomized, single-group design. Listed cohorts received single oral doses of 200 mg, 400 mg, 800 mg, or 1200 mg OZ439.

The primary endpoint was derived parasite reduction rate at 24 hours, reported by design as a median with full range. It was estimated using a regression fitted separately for each patient, with a variable lag phase followed by a linear decline in log parasite count. The endpoint result is not reported in the registry record.

The registry includes cohort-level serious and other adverse-event counts, but does not report detailed event attribution or timing. The analysis population, missing-data handling, confidence intervals, statistical plan, and sample-size justification are not reported in the registry record.

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