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Head and Neck Squamous Cell Carcinoma Phase 2 Binary Endpoint NCT01469546

Phase II Trial Evaluating Axitinib In Patients With Unresectable, Recurrent Or Metastatic Head And Neck Cancer: Complete Statistical Analysis

This analysis concerns a single-arm phase II study of axitinib in unresectable, recurrent or metastatic head and neck cancer. The registry record describes the six-month progression-free survival endpoint and the analyzed population, but does not report the endpoint result.

Trial start: 2012-01  ·  Enrollment: 42  ·  Sponsor: University of Michigan Rogel Cancer Center
Scope of this record

This page provides an independent statistical analysis and educational interpretation of publicly reported results. ClinicalTrials.gov provides the official trial registry record. Numerical trial results on this page are restricted to the results posted in the ClinicalTrials.gov record; calculations added by Clinical Biostats are labelled as such.

1. Trial at a Glance

This page covers the registry results for Phase II Trial Evaluating Axitinib In Patients With Unresectable, Recurrent Or Metastatic Head And Neck Cancer (NCT01469546), a na phase 2 study. The primary outcome is Percentage of Patients Alive and Free of Progression at 6 Months.

42
Enrollment
Phase 2
n/a
Arms
In the primary outcome
n/a
Effect
No re-analysis shown
n/a
95% CI
See limitations
FeatureRegistry value
ClinicalTrials.gov identifierNCT01469546
PhasePhase 2
ConditionHead and Neck Squamous Cell Carcinoma
AllocationNot applicable (single group)
Design modelSingle Group
MaskingNone (open label)
Enrollment42
Arms in the primary outcomen/a
Lead sponsorUniversity of Michigan Rogel Cancer Center
Results postedYes

2. Clinical Question

Population

Patients with unresectable, recurrent or metastatic head and neck squamous cell carcinoma were eligible for the study description. Participants had received no more than two prior lines of systemic therapy for recurrent or metastatic disease. The registry record says 42 patients were enrolled; 12 did not complete the first cycle or undergo repeat tumor imaging, and 30 were analyzed for the primary endpoint.

Intervention

The intervention was axitinib (AG-013736), an oral drug described in the study summary as taken twice daily. This was an open-label study, so treatment masking was absent.

Comparator

There was no concurrent comparison group. The study is described as single-arm, and allocation is listed as not applicable. The results therefore cannot provide a randomized, like-for-like comparison with another treatment or a control group.

Primary question

The primary question was to determine the six-month progression-free survival rate among patients treated with axitinib. The endpoint concerns whether patients were alive and free of progression at that time point. The registry record does not report the rate or its uncertainty, so the size and precision of the endpoint result cannot be assessed from this record.

3. Trial Design

This was a phase II, prospective, single-institution, single-arm study of axitinib in patients with unresectable, recurrent or metastatic head and neck squamous cell carcinoma. The intervention is listed as axitinib (AG-013736). The study summary describes the drug as a pill taken twice a day. Masking was absent, and the study was open-label. Allocation is listed as not applicable because there was no randomized assignment among treatment groups.

The arm description states that eligible patients had received no more than two prior lines of systemic therapy for recurrent or metastatic head and neck cancer. The registry record lists 42 enrolled patients. For the primary endpoint, it says 12 patients did not complete the first cycle or undergo repeat tumor imaging because of an adverse event, disease progression, non-compliance or physician discretion. It states that 30 patients were analyzed.

The primary endpoint was the percentage of patients alive and free of progression at 6 months. Secondary outcomes listed in the record include response or stable disease, grade 3 or 4 toxicities, and median progression-free survival. The registry record does not report results for those outcomes in the information. It also does not report a statistical analysis plan, a sample-size justification, or details of interim analyses. The study status is completed, but completion status alone does not supply endpoint results or establish how the study findings should be interpreted.

4. Participant Flow and Accounting

The registry reports how participants moved through each stage of the study. All counts below are exactly as posted; missing counts are not inferred from other stages.

Before assignment: 42 patients were enrolled. 12 patients did not complete the first cycle or undergo repeat tumor imaging (due to adverse event, disease progression, non-compliance or physician discretion). Only 30 patients were analyzed..

Received 5 mg Dose

StageAxitinib (AG-013736)
STARTED42
Completed First Cycle30
COMPLETED19
NOT COMPLETED23

Reasons for not completing this period:

ReasonAxitinib (AG-013736)
Adverse Event13
Death2
Protocol Violation2
Progressive Disease3
Physician Decision3

Dose Escalation to 10 mg

StageAxitinib (AG-013736)
STARTED19
COMPLETED19
NOT COMPLETED0

Analysis population for the primary outcome, as defined in the registry: 42 patients were enrolled. 12 patients did not complete the first cycle or undergo repeat tumor imaging (due to adverse event, disease progression, non-compliance or physician discretion). Only 30 patients were analyzed.

5. Baseline Characteristics

The table reproduces the baseline characteristics posted in the registry, which describe the participants analysed at baseline and help show whether the randomized groups were comparable.

Population: 42 patients were enrolled. 12 patients did not complete the first cycle or undergo repeat tumor imaging (due to adverse event, disease progression, non-compliance or physician discretion). Only 30 patients were analyzed.

CharacteristicUnitAxitinib (AG-013736)
Participants analysed30
Age, Continuousyears62 (40.0 to 84.0)
Sex: Female, Male: FemaleParticipants7
Sex: Female, Male: MaleParticipants23

6. Primary Endpoint

The registry lists the primary outcome as Percentage of Patients Alive and Free of Progression at 6 Months, measured over 6 months.

ElementRegistry entry
Result typeNumber
Measure of spreadnot applicable
Unitpercentage of patients
Endpoint classificationBinary Endpoint

The primary endpoint is the percentage of patients alive and free of progression at 6 months. Progression-free survival combines two events relevant to the endpoint: disease progression and death. At the stated time point, the measure describes the proportion meeting the endpoint definition, rather than the duration of disease control for each individual or a comparison between treatments.

As a general statistical explanation, a fixed-time progression-free survival rate can give a clinically interpretable snapshot of the trial population's status at a specified follow-up point. Its interpretation depends on how progression and death were defined, how follow-up was handled, and which patients contributed to the analysis. Those details are not reported in the registry record. The record names the endpoint and its timeframe, but does not provide the observed rate, an uncertainty interval, or further information on censoring and assessment procedures. Consequently, the estimate's magnitude and precision cannot be evaluated from the registry record.

7. Why No Re-analysis Is Shown

Reported as posted, not recalculated. Not a randomized comparison (allocation: NA); arms are not a like-for-like control comparison. A result is recalculated only when the posted data support a clean two-arm comparison, so no result is shown beyond what the sponsor posted.

8. Statistical Interpretation

Clinical Biostats interpretation

The registry record identifies six-month progression-free survival as the primary endpoint, but does not report the observed rate. It therefore does not show how many of the analyzed patients were alive and free of progression at that time point, nor does it provide an estimate of uncertainty. Without those results, the primary outcome cannot be quantified or judged for precision from the record.

The endpoint population also requires attention. The record states that 42 patients were enrolled, 12 did not complete the first cycle or undergo repeat tumor imaging, and 30 were analyzed. The listed reasons include adverse event, disease progression, non-compliance or physician discretion. The record does not explain how these patients were handled in calculating the endpoint, or whether the analysis population was defined in advance. Since progression and adverse events appear among the reasons for not contributing to the primary analysis, the absence of detail about their handling matters when assessing possible selection effects.

The study had no concurrent control group. Any observed outcome would describe the treated study group under the study's conditions; it would not, by itself, estimate a difference from another treatment or establish what would have happened to comparable patients without axitinib. Differences in patient characteristics, follow-up, or care cannot be separated from treatment effects through a randomized comparison in this design.

The open-label design means participants and study staff were not masked to treatment. This does not make the endpoint unusable, but can matter for outcomes involving judgment, such as the assessment of progression, depending on the assessment procedures. Those procedures are not reported in the registry record. The endpoint result and its precision are also absent, so these design considerations cannot be weighed against a reported estimate.

The listed adverse-event figures are separate from the primary efficacy endpoint. They describe serious adverse events recorded for the axitinib group and should not be used as a substitute for the progression-free survival result. Nor do these figures, on their own, establish that an event was caused by treatment. Overall, the record identifies the study question and some design and safety information, but leaves the central endpoint estimate and important analytical details not reported in the registry record.

9. Statistical Methods Explained

What does a single-arm design estimate?

This study is described as single-arm, with no concurrent control group. In general, a single-arm trial estimates outcomes among the participants who receive the intervention under the study conditions. It does not directly estimate the contrast between that intervention and a comparison treatment. Historical results may sometimes be used for context, but no such comparison or benchmark is reported in the registry record. Differences between a study group and a separate population can reflect differences in eligibility, disease status, follow-up or other factors, as well as treatment.

The trial was open-label and masking was listed as absent. As a general matter, lack of masking may matter when outcomes depend on clinical assessment or participant reporting. The record does not report whether progression assessments were independently reviewed or what procedures were used to reduce assessment bias.

How should a fixed-time rate be understood?

The primary outcome is a percentage of patients alive and free of progression at 6 months. In general, a fixed-time rate expresses the share of an analysis population meeting a specified status at a particular follow-up point. It is distinct from a median time-to-event measure: the two summarize different aspects of outcomes and are not interchangeable. The registry record provides the endpoint definition and timeframe but not the observed rate, uncertainty interval, or calculation details.

As a general statistical concept, a confidence interval describes a range of estimates compatible with the data under the method's assumptions, and communicates uncertainty around an estimate. The registry record does not report a confidence interval for the primary endpoint. It also does not report the statistical method used to obtain the rate or its uncertainty, so no particular interval method can be attributed to this trial.

Why does the analysis population matter?

The record says 42 patients were enrolled and 30 were analyzed for the primary endpoint. It also reports that 12 did not complete the first cycle or undergo repeat tumor imaging, with reasons including adverse event, disease progression, non-compliance or physician discretion. In general, excluding participants from an endpoint analysis can affect the estimate if the excluded participants differ in outcome from those retained. This is especially relevant when reasons for exclusion may relate to disease status or treatment experience.

The record does not describe the endpoint handling of those 12 patients, whether follow-up information was used for any of them, or whether additional missing endpoint data occurred among the analyzed group. It does not state whether the analysis was based on all enrolled participants, a prespecified subset, or another analysis population definition. These points are not reported in the registry record, so the potential influence of missing outcome information cannot be quantified.

What can the safety summaries tell readers?

The record reports 42 patients at risk for the serious adverse-event summary and 22 affected by a serious adverse event. It also lists 42 at risk and 37 affected for other adverse events. These are different summaries and should not be combined. The serious-event terms include death not associated with a CTCAE term and several other categories. The registry record does not give a patient-level breakdown, explain whether categories overlap, or state the causal relationship between events and treatment. As a general principle, adverse-event listings describe events observed and recorded during a study; they do not, alone, establish causation.

Over-dispersion is a general statistical issue in count data when observed variability exceeds what a simple model assumes. It can affect uncertainty estimates and model fit. The record does not identify a count model or report an over-dispersion analysis; therefore, this concept should not be mistaken for a method used in this trial.

What statistical plan is documented?

The registry record does not report a statistical analysis plan, the method for the primary endpoint, a sample-size justification, or interim analyses. It lists secondary outcomes but does not provide the corresponding results or describe how multiple outcomes were handled. General methods such as adjustment for multiple comparisons, sensitivity analyses or prespecified subgroup analyses cannot be attributed to this study without documentation. The absence of these details limits the ability to assess whether analyses were planned in advance and how robust the reported findings would be. No primary endpoint estimate is reported in the registry record, so recalculation from posted summary statistics is not possible.

10. Exact Estimates for Each Arm

No two-arm comparison is shown for this trial, but each arm's result can still be summarized with exact interval estimates computed from the posted counts. The Clopper-Pearson interval is exact and conservative; the Wilson interval is a common closer-to-nominal alternative; the Bayesian credible interval uses a uniform Beta(1, 1) prior. For small groups the three can differ noticeably.

ArmParticipantsEventsObserved %Clopper-Pearson 95% CIWilson 95% CIBayesian 95% credible interval
Axitinib (AG-013736)30826.7%12.3% to 45.9%14.2% to 44.4%14.2% to 44.6%

R code and output

arm    <- c("Axitinib (AG-013736)")
n      <- c(30)
events <- c(8)
for (i in seq_along(n)) {
  ci <- binom.test(events[i], n[i])$conf.int          # Clopper-Pearson exact interval
  cr <- qbeta(c(0.025, 0.975), 1 + events[i], 1 + n[i] - events[i])   # Bayesian, uniform Beta(1,1) prior
  wi <- (function(x, n) { p <- x / n; z <- qnorm(0.975); d <- 1 + z^2 / n
    c((p + z^2 / (2 * n) - z * sqrt(p * (1 - p) / n + z^2 / (4 * n^2))) / d, (p + z^2 / (2 * n) + z * sqrt(p * (1 - p) / n + z^2 / (4 * n^2))) / d) })(events[i], n[i])
  cat(sprintf("ARM|%s|%d|%d|%.1f|%.1f|%.1f|%.1f|%.1f|%.1f|%.1f\n", arm[i], n[i], events[i], 100 * events[i] / n[i],
              100 * ci[1], 100 * ci[2], 100 * wi[1], 100 * wi[2], 100 * cr[1], 100 * cr[2]))
}
ARM  Axitinib (AG-013736)  30  8  26.7  12.3  45.9  14.2  44.4  14.2  44.6

11. Multiplicity, Missing Data and Analysis Populations

The registry record lists a primary endpoint and secondary outcomes, including response or stable disease, grade 3 or 4 toxicities, and median progression-free survival. It does not report a statistical analysis plan or explain whether and how the interpretation of multiple outcomes was addressed. Any multiplicity procedure, hierarchy among outcomes, or distinction between confirmatory and exploratory analyses is not reported in the registry record.

For the primary endpoint, the record states that 42 patients were enrolled, 12 did not complete the first cycle or undergo repeat tumor imaging, and 30 were analyzed. The reasons given include adverse event, disease progression, non-compliance or physician discretion. The record does not specify how those patients were handled in the endpoint calculation, whether the analysis population was defined before data review, or how any further missing information was treated. The impact of missing outcomes cannot be quantified from the available information.

The registry record does not report an approach to interim analyses, a sample-size justification, or details of sensitivity analyses. It also does not report the primary estimate or its uncertainty. These omissions mean readers cannot assess the planned error-control strategy, the influence of missing data, or the precision of the endpoint estimate based on the registry record. They do not establish that a particular analysis was or was not performed; those details are simply not reported in the registry record.

12. Safety Results

The registry reports serious adverse events as affected participants divided by participants at risk.

ArmParticipants with serious adverse eventsParticipants at riskPercentage
Axitinib (AG-013736)224252.4%

Other (non-serious) adverse events

Participants with at least one non-serious event at or above the registry's 0% reporting threshold.

ArmParticipants affected of at risk
Axitinib (AG-013736)37 of 42

Most frequent serious adverse event terms

Event termOrgan systemAxitinib (AG-013736)
Death not associated with CTCAE termGeneral disorders6 of 42
Hemorrhage, GIVascular disorders3 of 42
Hemorrhage, pulmonary/upper respiratoryVascular disorders2 of 42
Infection with unknown ANC, LungInfections and infestations2 of 42
Pain, ChestGeneral disorders2 of 42
Supraventricular and nodal arrhythmiaCardiac disorders1 of 42
Sinus tachycardiaCardiac disorders1 of 42
Cardiac ischemia/infarctionCardiac disorders1 of 42
Pericardial effusion (non-malignant)Cardiac disorders1 of 42
DehydrationGastrointestinal disorders1 of 42

Most frequent non-serious adverse event terms

Event termOrgan systemAxitinib (AG-013736)
Fatigue (asthenia, lethargy, malaise)General disorders26 of 42
DiarrheaGastrointestinal disorders11 of 42
Mucositis/stomatitis (functional/symptomatic)Gastrointestinal disorders11 of 42
Pain, Oral CavityGastrointestinal disorders10 of 42
Weight lossGeneral disorders9 of 42
AnorexiaGastrointestinal disorders8 of 42
ConstipationGastrointestinal disorders8 of 42
HypertensionCardiac disorders7 of 42
Pain, HeadNervous system disorders7 of 42
NauseaGastrointestinal disorders6 of 42

Serious events with the highest arm-level rate: death not associated with ctcae term (14.3%), hemorrhage, gi (7.1%), hemorrhage, pulmonary/upper respiratory (4.8%), infection with unknown anc, lung (4.8%), pain, chest (4.8%).

Do not overextend the safety comparison. Serious-adverse-event counts are safety observations, not efficacy outcomes, and should not be combined with the primary result into a single benefit-risk number.

The serious adverse-event summary lists 42 patients at risk and 22 affected. A separate summary lists 42 at risk and 37 affected for other adverse events. These figures describe different event groupings and should be read separately. The record also lists serious-event terms with percentages: death not associated with a CTCAE term, 14.3%; hemorrhage, GI, 7.1%; hemorrhage, pulmonary/upper respiratory, 4.8%; infection with unknown ANC, Lung, 4.8%; pain, Chest, 4.8%; and supraventricular and nodal arrhythmia, 2.4%.

These entries are event summaries, not evidence by themselves that axitinib caused an event. The registry record does not explain whether patients could appear in more than one category, provide event-level details, or report causal assessments. The listed term “Death not associated with CTCAE term” should be read as the label recorded for that serious adverse-event category, not as a complete accounting of deaths from any cause. These safety figures do not report the primary progression-free survival endpoint.

13. What the Result Does, and Does Not, Mean

The study addresses a defined clinical research question: the six-month progression-free survival rate among patients with unresectable, recurrent or metastatic head and neck squamous cell carcinoma treated with axitinib. The registry record supplies design information and states that 30 patients were analyzed for the primary endpoint. However, it does not report the observed endpoint rate or its uncertainty. The outcome's magnitude and precision therefore cannot be interpreted from this record.

Even if an outcome estimate were available, this single-arm, open-label phase II design would describe the treated study group rather than provide a randomized treatment comparison. Without a concurrent comparator, differences from an external population would be difficult to attribute specifically to treatment. The registry record does not report a control group or an external benchmark.

The record's analysis population also warrants caution. It reports that 12 enrolled patients did not complete the first cycle or undergo repeat tumor imaging, for reasons that include adverse event and disease progression. The endpoint treatment of these patients is not reported in the registry record. The possible effect of their exclusion or missing follow-up therefore cannot be assessed.

The serious adverse-event figures provide a separate description of recorded safety events, but do not establish causation or replace the efficacy endpoint. Details about overlap among event categories and causal assessments are not reported. The record also does not report the statistical analysis plan, sample-size justification, interim analyses or multiplicity approach. These limitations mean the registry record supports a description of the trial design and selected recorded outcomes, but not a conclusion about the size, precision or comparative meaning of the primary result.

14. Why This Trial Matters Statistically

This trial illustrates why design and analysis populations are central to interpreting a phase II study. A single-arm study can describe outcomes in a treated group, but has no randomized concurrent comparator to separate treatment effects from other explanations. The open-label design adds a related consideration for outcomes that involve clinical assessment. Neither feature makes the endpoint meaningless; both shape what conclusions the design can support.

The primary endpoint is a fixed-time progression-free survival rate, and the record identifies the analysis population as 30 patients. It also notes that 12 enrolled patients did not complete the first cycle or undergo repeat imaging, including because of adverse event or progression. How those patients were handled is not reported in the registry record. This makes the distinction between enrollment and endpoint analysis especially important when interpreting any estimate.

The registry record does not report the primary estimate or its uncertainty. That absence prevents readers from assessing the endpoint's magnitude and precision. It also does not report key analytical details, including the statistical plan and handling of multiple outcomes. The listed serious adverse-event summaries offer some safety information, but they do not resolve these gaps or establish causality.

Statistically, the study is useful as an example of the limits of interpreting a named endpoint without its result and analysis details. It shows why readers need the endpoint estimate, uncertainty, analysis-population definition, and transparent handling of missing outcomes to evaluate what the evidence can support. The record documents a focused research question and a completed phase II design, while leaving those interpretive elements not reported in the registry record.

15. Limitations

The registry record does not report the primary endpoint result, so its magnitude and precision cannot be evaluated. It also does not report a confidence interval or the statistical method used to calculate the six-month rate. The listed analysis population is 30 patients, while 12 enrolled patients did not complete the first cycle or undergo repeat tumor imaging. Their endpoint handling is not reported in the registry record; the listed reasons include adverse event, disease progression, non-compliance or physician discretion.

The study was single-arm and open-label, with no concurrent comparator. This limits treatment-effect comparisons and leaves the potential influence of assessment expectations unclear. Procedures for progression assessment, including any independent review, are not reported in the registry record. The record also does not state whether endpoint definitions or analysis populations were prespecified.

Other missing information includes the statistical analysis plan, sample-size justification, interim-analysis procedures, multiplicity handling, and sensitivity analyses. Although secondary outcomes are listed, their results are not reported in the registry record. The serious adverse-event summaries do not include causal assessments or clarify whether event categories overlap. These limitations are specific to what the record documents and prevent a fuller assessment of efficacy, uncertainty, missing-data effects and safety attribution.

16. Related Tutorials

17. Related Statistical Calculators

18. Sources

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Use this trial's endpoint as a starting point for deeper study of effect measures, confidence intervals, and sample-size planning.

19. Record Summary

The registry record describes a completed, open-label, single-arm phase II study of axitinib in unresectable, recurrent or metastatic head and neck squamous cell carcinoma. The primary endpoint was the percentage of patients alive and free of progression at 6 months. The record states that 42 patients were enrolled, 12 did not complete the first cycle or undergo repeat tumor imaging, and 30 were analyzed. It lists serious adverse-event summaries and secondary outcomes. The primary endpoint result, its uncertainty, and key statistical-analysis details are not reported in the registry record. With no concurrent comparator, the design describes outcomes in the treated group rather than a randomized treatment contrast.

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