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Why Mixed-Effects Models · Tutorial 10 of 797

Dropout Changes the Composition of the Observed Population Mean

Learn to calculate how dropout changes a pooled mean, distinguish that compositional shift from within-subject change, and interpret the observed mean carefully.

Beginner 11 min read

What You'll Learn

  • Calculate a pooled concentration mean using only subjects observed at a visit.
  • Separate changes in survivors’ concentrations from changes in which subjects remain observed.
  • Determine how the concentration profiles of dropouts affect the direction of compositional change.
  • Compare an observed-case mean with a fixed-cohort mean and state what each summarizes.
  • Identify useful dropout diagnostics and recognize what observed data cannot reveal.

Why a Pooled Mean Can Change When Subjects Drop Out

At a given visit, a pooled concentration mean summarizes the subjects whose concentrations are recorded at that visit. If subjects with particular concentration profiles stop contributing measurements, the set of subjects behind the mean changes. The later pooled mean can therefore differ from an earlier mean for two reasons: concentrations changed within subjects, and the observed subjects are no longer compositionally the same group.

These are distinct explanations. A pooled mean is not automatically the mean trajectory of a fixed group of subjects. To interpret it, identify the visit-specific denominator and consider how the subjects who remain differ from those who dropped out. The calculations below use hypothetical data; the concentrations and dropout patterns are illustrative, not study results.

Definition: Let \(C_{ij}\) denote the concentration for subject \(i\) at visit \(j\), and let \(R_{ij}=1\) if that concentration is observed and \(R_{ij}=0\) otherwise. The observed-case pooled mean at visit \(j\) is the arithmetic mean among subjects with \(R_{ij}=1\): $$ \bar{C}_{\mathrm{obs},j} = \frac{\sum_i R_{ij}C_{ij}}{\sum_i R_{ij}}. $$ Its denominator is the number of subjects observed at that visit. It describes those observed subjects, not necessarily all subjects originally enrolled.

For comparison, the fixed-cohort mean at visit \(j\) would average the concentrations for the entire original cohort, whether or not every value was recorded. When some values are missing, that mean cannot be calculated directly from observed concentrations alone. It is a different target from the observed-case mean and requires additional information or assumptions to estimate.

Separating Within-Subject Change from Composition

Consider a cohort that had baseline measurements for everyone. At a later visit, divide the original cohort into subjects still observed and subjects who have dropped out. Let \(S\) be the set still observed at the later visit and \(D\) the set no longer observed. Write \(\bar{C}_{S,0}\) for the baseline mean among eventual survivors, \(\bar{C}_{D,0}\) for the baseline mean among eventual dropouts, and \(\bar{C}_{S,1}\) for the later mean among survivors. The baseline mean for the full cohort is a weighted average of the two baseline subgroup means.

$$ \bar{C}_{\mathrm{all},0} = \frac{n_S}{n}\bar{C}_{S,0} + \frac{n_D}{n}\bar{C}_{D,0}, \qquad n=n_S+n_D. $$

Add and subtract \(\bar{C}_{S,0}\) from the observed later-minus-baseline difference. This gives an exact decomposition, not an approximation:

$$ \begin{aligned} \bar{C}_{S,1}-\bar{C}_{\mathrm{all},0} &= \left(\bar{C}_{S,1}-\bar{C}_{S,0}\right) + \left(\bar{C}_{S,0}-\bar{C}_{\mathrm{all},0}\right). \end{aligned} $$

The first term is the mean within-subject change among the subjects who remain observed, because the same subjects contribute at both visits. The second term is a baseline composition difference: it compares the eventual survivors’ baseline mean with the full cohort’s baseline mean. If survivors started with higher concentrations, this term is positive; if they started lower, it is negative. The decomposition explains why a pooled change need not equal the change experienced by a typical subject in the original cohort.

This calculation has a practical assumption: baseline concentrations are available for the subjects being compared, and the later observed subjects can be identified as members of the baseline cohort. It does not recover the unobserved later concentrations of dropouts. In particular, the decomposition describes the observed survivors and their baseline composition; it does not prove what the full cohort’s later mean would have been.

Worked Example: A Later Mean Rises Despite Declines in Every Observed Subject

Four hypothetical subjects have the following concentrations at baseline. At the later visit, the two subjects with lower baseline profiles have dropped out. The remaining subjects’ concentrations have both declined.

SubjectBaseline concentration (mg/L)Later concentration (mg/L)Observed later?
A108Yes
B86Yes
C4Not recordedNo
D2Not recordedNo

The baseline mean for all four subjects is \((10+8+4+2)/4=24/4=6\) mg/L. The observed later mean is \((8+6)/2=14/2=7\) mg/L. It is 1 mg/L higher than the full-cohort baseline mean, even though both observed subjects declined: A changed by \(8-10=-2\) mg/L and B by \(6-8=-2\) mg/L.

The decomposition shows why. The baseline mean among the two eventual survivors is \((10+8)/2=9\) mg/L, so their mean within-subject change is \(7-9=-2\) mg/L. Their baseline composition difference is \(9-6=3\) mg/L. Adding the terms gives \(-2+3=1\) mg/L, exactly the observed later-minus-baseline difference.

The rise in the pooled mean does not indicate that concentrations rose in the observed subjects. It arises because the later mean includes only subjects who began with higher concentrations. The later values for C and D are unknown, so the full-cohort later mean cannot be calculated from these data.

How the Dropouts’ Profiles Determine the Direction

A second useful identity compares the observed later mean with the full-cohort mean that would be available if every subject had a value at that visit. Let \(q=n_D/n\) be the dropout fraction, and let \(\bar{C}_{D,1}\) denote the mean later concentration among dropouts. The full-cohort mean is the weighted average of the survivor and dropout means. Subtracting it from the survivor mean gives:

$$ \begin{aligned} \bar{C}_{\mathrm{all},1} &=(1-q)\bar{C}_{S,1}+q\bar{C}_{D,1},\\ \bar{C}_{S,1}-\bar{C}_{\mathrm{all},1} &=q\left(\bar{C}_{S,1}-\bar{C}_{D,1}\right). \end{aligned} $$

Thus, if dropouts would have had lower later concentrations than survivors, the observed-case mean is higher than the full-cohort mean; if they would have had higher concentrations, it is lower. If the two groups have equal means, this particular compositional difference is zero. The identity is exact, but in real dropout data \(\bar{C}_{D,1}\) is usually unobserved. The direction and size of the difference cannot be confirmed from the observed later concentrations alone.

Worked Example: Quantifying a Composition Difference When All Values Are Known

Suppose a hypothetical four-subject data set has later concentrations of 9, 7, 5, and 3 mg/L. The subjects with values 9 and 7 remain observed; those with values 5 and 3 drop out before the visit. These values are all shown here only to demonstrate the arithmetic.

The observed-case mean is \(\bar{C}_{S,1}=(9+7)/2=8\) mg/L. The full-cohort mean is \(\bar{C}_{\mathrm{all},1}=(9+7+5+3)/4=24/4=6\) mg/L. Here \(q=2/4=0.5\), and the dropout mean is \(\bar{C}_{D,1}=(5+3)/2=4\) mg/L.

Using the identity, the difference is \(q(\bar{C}_{S,1}-\bar{C}_{D,1})=0.5(8-4)=2\) mg/L. The observed-case mean is therefore 2 mg/L above the full-cohort mean, matching \(8-6=2\) mg/L. In an actual dropout setting the two missing values would not be available, which is exactly why the full-cohort comparison cannot generally be recovered by this calculation alone.

When Dropout Does and Does Not Shift the Mean

Dropout by itself does not guarantee a compositional shift. The issue is whether the probability of remaining observed is related to concentration profiles relevant to the mean. If, at a visit, subjects are lost in a way unrelated to their concentrations at that visit, then the observed-case mean can be unbiased for the full-cohort mean under suitable repeated-sampling assumptions. That does not mean the observed mean must equal the full-cohort mean in every realized sample: random selection can produce a difference by chance, especially when few subjects remain.

In contrast, when dropout is associated with concentration level or trajectory, the observed group can systematically differ from the original cohort. For example, if subjects with low concentrations are more likely to stop contributing measurements, the observed mean tends to be higher than the full-cohort mean. If higher-concentration subjects are more likely to drop out, the direction may reverse. A reason for dropout need not be concentration itself: a clinical event or burden of participation may be related to a profile and thereby alter which subjects remain.

Keep the target clear when comparing summaries. An observed-case mean answers, “What was the mean among subjects measured at this visit?” A fixed-cohort mean answers, “What was the mean for the original cohort at this visit?” These questions are not interchangeable. A mean based only on completers can be a useful description of completers, but it should not silently be interpreted as a description of everyone enrolled.

Diagnostics, Alternatives, and Limits

Start by reporting the number of subjects contributing at every visit. Then examine whether the subjects who later drop out differ from those who remain in characteristics already observed, such as baseline concentration or early concentration changes. A plot of individual profiles can help reveal whether measurements end disproportionately among subjects with particular levels or trajectories. These checks can identify warning signs, but they cannot establish the unobserved concentrations that dropouts would have had at later visits.

A few alternatives answer different questions rather than automatically solving the same one. The observed-case mean is transparent and requires no substituted values, but describes only those observed. A baseline-cohort comparison can show whether eventual survivors started differently from the full cohort, as in the decomposition above, but it does not supply their missing later values. A standardized summary can combine subgroup means using fixed, stated weights, but its interpretation depends on the subgroups and weights chosen and on having the information needed to calculate the subgroup means. No arithmetic choice alone reveals missing outcomes without assumptions.

A useful failure check is to ask whether the displayed mean and denominator refer to the same target at each visit. If the denominator shrinks, a change in the mean may reflect changing composition as well as concentration change. If the dropout pattern is related to concentration profiles, treating the later observed mean as if it were the original cohort’s mean is especially difficult to justify. Conversely, changing denominators alone do not prove bias: the relevant issue is how observation relates to the concentrations of interest.

Common pitfall: “The pooled mean increased, so concentrations increased in the population.” This conclusion does not follow when the subjects contributing to the mean changed. Compare the same subjects over time to describe their observed within-subject change, and state separately that the observed-case mean describes the subjects measured at each visit. The missing later values prevent a direct conclusion about the full cohort’s later mean.

Check Your Understanding

Use the definitions and calculations in this tutorial. The solutions are included so you can check both the arithmetic and the interpretation.

  1. At baseline, four subjects have concentrations 12, 8, 6, and 2 mg/L. At the next visit, the subjects with baseline concentrations 12 and 8 remain, and their concentrations are 9 and 7 mg/L. Calculate the baseline full-cohort mean, later observed-case mean, and the two terms in the decomposition.
  2. At a visit, 25% of the cohort has dropped out. If the mean later concentration among survivors is 10 mg/L and the dropout group’s later mean, if known, is 6 mg/L, by how much does the observed-case mean exceed the full-cohort mean?
  3. If subjects drop out independently of their concentration profiles, must the observed-case mean equal the full-cohort mean in the realized data? Explain.
  4. A report gives a later mean concentration but not the number or identity of subjects measured. What information is missing for interpreting that mean in the presence of dropout?

Solutions. (1) The baseline mean is \((12+8+6+2)/4=28/4=7\) mg/L. The later observed mean is \((9+7)/2=8\) mg/L. The survivors’ baseline mean is \((12+8)/2=10\) mg/L, so their within-subject mean change is \(8-10=-2\) mg/L and the composition term is \(10-7=3\) mg/L. Their sum, \(-2+3=1\) mg/L, equals the observed later-minus-baseline difference. (2) The dropout fraction is \(q=0.25\), so the observed-minus-full-cohort difference is \(q(10-6)=0.25(4)=1\) mg/L. (3) No. Independence can make the observed mean unbiased for the full-cohort mean under suitable sampling assumptions, but random differences remain possible in a particular data set. (4) At minimum, the visit-specific denominator and who contributed measurements are needed to assess how the observed group changed. Comparing those measured with those no longer observed on available earlier profiles can help diagnose composition differences, but cannot reveal the missing later concentrations.