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Repeated Significance Testing · Tutorial 17 of 699

Optional Stopping and False-Positive Claims

See why a valid fixed-sample p-value does not automatically justify a claim made after a data-dependent stopping decision.

Beginner 9 min read

What You'll Learn

  • State the fixed-sample Type I error guarantee and what it does not cover.
  • Express a data-dependent rejection claim as an event over the monitoring process.
  • Calculate false-positive risk for a simple repeated-testing rule.
  • Distinguish outcome-dependent stopping from stopping independent of the test data.
  • Identify reporting and design choices that can make a nominal p-value misleading.

Why the Stopping Decision Matters

A significance test is calibrated for a specified analysis procedure. In a fixed-sample test, that procedure includes the sample size and the rule for rejecting \(H_0\). If the test has significance level \(\alpha\), then, under \(H_0\), its probability of rejection is at most \(\alpha\), assuming the model and test conditions hold. The guarantee concerns the procedure as a whole, not just the final arithmetic that produces a p-value.

The issue changes when researchers examine results during data collection and decide whether to stop partly because of what those results show. A nominally significant p-value from one look still describes that look's test under its fixed-sample assumptions. It does not, by itself, describe the probability that the full stopping-and-testing procedure would produce a false-positive claim. That overall probability depends on the rule for looking, stopping, and claiming significance.

Definition: The Type I error rate of a testing procedure is the probability, when \(H_0\) is true, that the procedure rejects \(H_0\). For a fixed-sample test at level \(\alpha\), this probability is at most \(\alpha\). For a procedure that may stop based on observed data, the Type I error rate must be evaluated for the combined procedure, including its stopping rule.

The key distinction is between a fixed-look guarantee and a procedure-wide guarantee. If a test would have a valid p-value at each prespecified sample size, that fact alone does not imply that the p-value reported at a data-selected sample size is valid at the same level. The sample size, the decision to stop, and the decision to make a claim can be statistically linked.

Fixed-Sample Validity and a Data-Selected Look

Let \(p_j\) denote the p-value at look \(j\), and suppose that, at any one fixed look, the test is valid under \(H_0\): for every \(u\) between 0 and 1, \(P(p_j \leq u \mid H_0) \leq u\). This inequality is the defining calibration property of a valid p-value. It ensures that a single test rejecting when \(p_j \leq \alpha\) has Type I error at most \(\alpha\).

Now let \(\tau\) be the look selected by a stopping rule, so the reported p-value is \(p_\tau\). If \(\tau\) depends on interim results, the event \(p_\tau \leq \alpha\) is not generally the same as the event that a p-value from one fixed analysis is at most \(\alpha\). For example, a rule that stops and claims success at the first \(p_j \leq \alpha\) rejects whenever at least one look crosses the threshold. Its null rejection event is

$$ \{\text{reject } H_0\} = \bigcup_{j=1}^{m}\{p_j \leq \alpha\}, $$

if the procedure continues whenever the threshold has not been crossed and makes no other rejection. The probability of this union is not generally bounded by \(\alpha\). Its value depends on the number of looks, their dependence, and the full stopping and rejection rules. Earlier material on repeated tests establishes why repeated opportunities to cross a threshold can change the overall error rate; the point here is that an outcome-dependent stopping decision is part of that same inferential procedure.

Worked Example: Two Independent Opportunities to Claim Significance

Hypothetical setup. Under \(H_0\), suppose two looks produce independent p-values, each uniformly distributed between 0 and 1. Each p-value is therefore valid at its own fixed look. The rule is to stop and claim significance if either p-value is at most 0.05; otherwise, finish at the second look and do not reject.

The probability of no false-positive claim is the probability that both p-values exceed 0.05. By independence,

$$ P(\text{no rejection} \mid H_0) = P(p_1 > 0.05)P(p_2 > 0.05) = 0.95 \times 0.95 = 0.9025. $$

Thus the overall Type I error rate is

$$ P(\text{rejection} \mid H_0) = 1 - 0.9025 = 0.0975. $$

Each individual test uses the nominal 0.05 threshold, but this stopping-and-claiming procedure has a 9.75% false-positive probability under the stated model, not 5%. The calculation relies on independence and the specified two-look rule. It is an illustration of why the single-test guarantee does not automatically transfer to a data-dependent procedure; it is not a general formula for dependent interim tests.

Not Every Stopping Rule Has the Same Effect

Optional stopping does not mean that every change in sample size necessarily increases the Type I error rate. The direction and size of any change depend on the stopping rule and test statistics. Stopping because a result looks significant creates a different selection mechanism from stopping because a study reaches a calendar deadline, and either differs from a rule that stops for futility and suppresses a claim. The correct question is not simply whether stopping occurred, but whether the procedure's null rejection probability is still controlled.

Worked Example: A Sample Size Chosen Independently of Outcomes

Hypothetical setup. A study uses either 100 or 200 observations. Before examining any outcomes, an independent administrative draw selects 100 observations with probability 0.4 and 200 with probability 0.6. Assume the test at either fixed sample size has an exactly uniform p-value under \(H_0\), and reject if the selected test's p-value is at most 0.05.

Because the sample-size choice is independent of the outcomes, the fixed-sample p-value remains uniform conditional on either selected sample size. Therefore,

$$ P(\text{reject } H_0 \mid H_0) = 0.4(0.05) + 0.6(0.05) = 0.05. $$

Here the random sample size does not change the Type I error rate: conditional on each possible size, the test is level 0.05, and the mixture of those conditional error rates is also 0.05. This conclusion requires the stated independence and validity at both sample sizes. It would not follow merely from observing that the final analysis used a random sample size.

Worked Example: A Data-Dependent Rule That Reduces Rejection Probability

Hypothetical setup. Under \(H_0\), let \(p_1\) and \(p_2\) be independent uniform p-values from two valid tests. After the first look, stop without making a significance claim if \(p_1 > 0.5\). Otherwise, continue to the second test and reject only if \(p_2 \leq 0.05\). This rule never claims significance based on the first p-value.

Rejection requires both \(p_1 \leq 0.5\) and \(p_2 \leq 0.05\). By independence,

$$ P(\text{rejection} \mid H_0) = P(p_1 \leq 0.5)P(p_2 \leq 0.05) = 0.5 \times 0.05 = 0.025. $$

The data-dependent stopping rule gives a 2.5% Type I error rate in this constructed example, below 5%. The example is not a recommended monitoring design; it demonstrates that outcome-dependent stopping does not have one universal effect. A rule that stops to claim significance and a rule that stops without allowing a claim define different rejection events.

Why the Nominal P-Value Can Mislead

Suppose a report says, “The final p-value was 0.04, so the study had a 5% false-positive rate.” That conclusion is justified only if the reported p-value comes from an analysis procedure for which the 5% guarantee holds. If the study repeatedly examined results and stopped when evidence seemed sufficient, the fixed-sample p-value at the stopping point does not account for the selection of that point. A p-value of 0.04 is not a 4% probability that \(H_0\) is true, nor does it directly give the chance that the study's overall claim is false.

The p-value can still be calculated correctly for the model and sample size used at the final look. The problem is not necessarily an arithmetic error. It is an interpretation error when that number is treated as if the final look had been selected in advance, although the decision to reach or report it was influenced by earlier results. The relevant error rate is the probability, under \(H_0\), that the entire procedure would make a claim.

Key takeaway: A nominally significant result after data-dependent stopping does not automatically retain the fixed-sample Type I error guarantee. The claim must be evaluated using a procedure that accounts for the actual stopping and rejection rules.

Practical Checks and Alternatives

Before interpreting a reported significance result, establish how the analysis was selected. Useful checks include whether the sample size and analysis time were set independently of observed outcomes, whether interim results were examined, whether stopping could be triggered by apparent benefit, and whether all analyses capable of supporting the claim were included in the stated procedure. If the rule is unclear, a reader cannot verify that the nominal level describes the overall false-positive risk.

There are several broad approaches, with different tradeoffs. A genuinely fixed-sample analysis uses one planned analysis and its single-test calibration. Repeated unadjusted tests apply the same nominal cutoff at multiple looks but do not generally preserve that single-test error rate for an any-look claim. A calibrated sequential procedure specifies how evidence will be assessed across monitoring and controls the procedure-wide error rate under its assumptions. The appropriate choice depends on the scientific and operational aims; one should not relabel an unadjusted repeated-testing result as a fixed-sample result.

ApproachWhat the nominal cutoff describesMain caution
One fixed, prespecified analysisThe rejection probability for that test under its assumptionsThe analysis must not be selected after inspecting results
Repeated unadjusted testingThe per-look test, not generally the any-look procedureRepeated chances to reject can alter overall Type I error
Calibrated sequential procedureThe error rate of the specified monitoring-and-rejection procedureIts assumptions and rules must match how the study is conducted

A common mistake is to argue, “The final analysis used a valid 0.05 test, so the overall chance of a false positive is at most 5%.” This confuses validity at one fixed analysis with validity after selecting an analysis based on observed data. The correction is to define the complete procedure, including when results are examined, how stopping occurs, and what counts as a rejection, and then assess its Type I error rate under \(H_0\).

This lesson has limits. It does not say that every nominally significant result after stopping is false, that every data-dependent rule inflates error, or that a p-value is unusable whenever a study changes course. It says that the usual single-test guarantee cannot be assumed without checking the procedure. Correct calibration also depends on the statistical model and other test assumptions; accounting for stopping cannot repair unrelated model violations.

Check Your Understanding

Answer each question using the distinction between a fixed-test guarantee and a procedure-wide guarantee.

  1. A valid test has level 0.05 at each of two independent looks, and the rule claims significance if either p-value is at most 0.05. What is the overall Type I error rate?
  2. Why does a final p-value of 0.03 not, by itself, establish that an outcome-dependent stopping procedure has a 5% Type I error rate?
  3. A sample size is selected by a coin toss independent of all outcomes. Each fixed-size test is valid at level 0.05. What is the overall Type I error rate, and what assumption makes the calculation valid?
  4. Does data-dependent stopping always increase Type I error? Explain using the futility-rule example.
  5. What event should be evaluated to determine the Type I error rate of a sequential stopping-and-claiming procedure?

Solutions. (1) \(1-(1-0.05)^2=0.0975\), or 9.75%, by independence. (2) The look at which the result is reported may have been selected using earlier outcomes, so the fixed-look p-value alone does not calibrate the full procedure. (3) The rate is \(0.05\), because each conditional fixed-size test has rate 0.05 and the size choice is independent of outcomes. (4) No. In the example, rejection requires \(p_1 \leq 0.5\) and \(p_2 \leq 0.05\), giving \(0.5 \times 0.05=0.025\); a different rule can have a different effect. (5) Evaluate the probability under \(H_0\) that the complete procedure, including its stopping and claiming rules, rejects \(H_0\).

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